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Genome-wide discovery of single- and multi-locus simple sequence repeat markers and their characterization in Dendrocalamus strictus: a commercial polyploid bamboo species of India
Dendrocalamus strictus , popularly known as “lathi baans”, is a multipurpose bamboo species known for its manifold domestic and industrial...
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Development of miRNA-SSR and target-SSR markers from yield-associate genes and their applicability in the assessment of genetic diversity and association map** in rice (Oryza sativa L.)
The gene-derived functional markers are considered effective to use in marker-assisted breeding and genetic diversity analysis. As of now, no...
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Whole Genome Wide SSR Markers Identification Based on ddRADseq Data
The advent of advanced NGS technologies have led to the generation of enormous amount of sequence data which further aid in the discovery of the... -
Genomic survey sequencing, development and characterization of single- and multi-locus genomic SSR markers of Elymus sibiricus L
BackgroundSiberian wildrye ( Elymus sibiricus L.) attracts considerable interest for grassland establishment and pasture recovery in the...
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Identification and characterization of functionally relevant SSR markers in natural Dalbergia odorifera populations
BackgroundDalbergia odorifera is a rare and precious rosewood specie, which is valued for its amber tones, abstract figural patterns, and...
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Development of EST-SSR Markers and Genetic Diversity Analysis Among Wild Pistachio Species
The encoded parts as well as the non-encoded parts of the eukaryote genomes have sequence replication units that are found in abundance and...
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Development of genomic SSR markers for characterization of genetic diversity in wild pomegranate germplasm
Wild pomegranate is a high-value crop for pharmaceutical industries. The lack of genetic and genomic resources in this medicinally important plant...
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Genetic diversity assessment for reintroduced Przewalski’s horse (Equus ferus) based on newly developed SSR markers
Przewalski’s horse ( Equus ferus ) is a national protected species in China. It first became extinct in the wild in 1976, and was reintroduced to the...
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Genic-SSR-based genetic diversity and population structure analysis in a global germplasm collection highlights the African origin of winged bean (Psophocarpus tetragonolobus L.)
Winged bean ( Psophocarpus tetragonolobus L.) is an underutilized legume of the family Fabaceae. We assembled 58,811 unigenes from the publicly...
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Genetic stability analysis of the temporary immersion bioreactors–derived sugarcane seedlings with simple sequence repeat (SSR) markers
The utilization of temporary immersion system-bioreactors (TIB) has shown promise for sugarcane micropropagation due to its capacity for high-yield...
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Molecular characterization of cowpea [Vigna unguiculata (L.) Walp.] subspecies with SSR markers
Cowpea, Vigna unguiculata , is an important food legume in the tropics and subtropics. However, cowpea is a complex species with more than 10...
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Development of novel SSR markers and validation by assessing the genetic diversity of endangered Deccan mahseer, Tor khudree
BackgroundThe Deccan mahseer, Tor khudree (Sykes, 1839) is a potential game and food fish species belonging to the family cyprinidae and is...
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Morphology and SSR markers reveal the genetic diversity of Elymus species germplasm in Northwestern China
The relationship between the genetic diversity and genetic characteristics of wild plant germplasm can provide insights for better utilization and...
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Cross-species transferability of soybean SSR markers to yam bean (Pachyrhizus erosus L.): an underutilized crop for diversity analysis
Yam bean ( Pachyrhizus erosus L.) is an underutilized tuber crop that has recently gained popularity because of its enormous advantages in terms of...
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Genetic diversity and DNA fingerprinting of Hemerocallis spp. accessions based on EST-SSR markers
Daylilies ( Hemerocallis spp.) are widely cultivated as perennial ornamentals worldwide with important edible, medicinal, and ornamental value. In...
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SSR marker-based genetic characterization of Turkish oriental tobaccos
BackgroundTurkey is one of the traditional oriental tobacco producing countries. Oriental tobaccos produced in Turkey are ecotypes specific to...
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Analyses of genetic diversity and population structure in Quercus griffithii Hook. f. & Thomson ex Miq. using simple sequence repeat (SSR) markers
Quercus griffithii is an ecologically and economically important tree species utilized for firewood, fodder, compost, and building-making. It is also...
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Genetic diversity and distinctness of flax (Linum usitatissimum L.) based on morphological and simple sequence repeat (SSR) markers
Determination of the distinctness, uniformity and stability (DUS) of plant cultivars is an important means of protecting the original innovations of...
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Genome survey sequencing-based SSR marker development and their validation in Dendrocalamus longispathus
Bamboo is an important genetic resource in India, supporting rural livelihood and industries. Unfortunately, most Indian bamboo taxa are devoid of...
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SSR Marker–Based Genetic Diversity and Relationship Analyses of Stephania tetrandra S. Moore
Stephania tetrandra S. Moore (family: Menispermaceae), a dioecious herbaceous vine and the only species in the subgenus Botryodiscia of the genus Stephania...