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Cold Spot SCANNER: Colab Notebook for predicting cold spots in protein–protein interfaces
BackgroundProtein–protein interactions (PPIs) are conveyed through binding interfaces or surface patches on proteins that become buried upon binding....
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Next-generation MRI scanner designed for ultra-high-resolution human brain imaging at 7 Tesla
To increase granularity in human neuroimaging science, we designed and built a next-generation 7 Tesla magnetic resonance imaging scanner to reach...
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Evaluation of surface damage for in-service deteriorated agricultural concrete headworks using 3D point clouds by laser scanning method
In the agricultural field, concrete headworks is the most important structure for the irrigation system. In recent years, a number of agricultural...
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Pioneer root invasion and fibrous root development into disturbed soil space observed with a flatbed scanner method
Key MessageFine roots with thick diameter preferentially elongated into disturbed soil space, indicating positive invasion of pioneer roots that...
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Spatial and temporal patterns of root dynamics in a Bornean tropical rainforest monitored using the root scanner method
AimsRoot phenology patterns in tropical regions are poorly understood because limited data are available. Using the root scanner method, the aims of...
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Method to measure tree-ring width, density, elemental composition, and stable carbon and oxygen isotopes using one sample
Tree-ring width (RW), density, elemental composition, and stable carbon and oxygen isotope (δ 13 C, δ 18 O) are widely used as proxies to assess climate...
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Enabling soil carbon farming: presentation of a robust, affordable, and scalable method for soil carbon stock assessment
The main hurdle in instrumentalizing agricultural soils to sequester atmospheric carbon is the development of methods to measure soil carbon stocks...
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Optimization of evaluation method for low nitrogen tolerance in soybean germplasm seedlings
Nitrogen is a critical macro-nutrient for growth and development of soybeans ( Glycine max L.). Improving nitrogen use efficiency and develo** low...
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Oblique radiographic measurement of knot position and orientation in logs
A novel X-ray scanner system to identify the positions of knots in logs is described. The scanner has a simple, low-cost design that is suitable for...
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Application of the TOPSIS decision-making method for selecting a manufacturing technique for children’s furniture elements with therapeutic functions
Making furniture or furniture elements that account for the needs of children at various stages of development or with psychomotor dysfunctions is...
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PICLS with human cells is the first high throughput screening method for identifying novel compounds that extend lifespan
Gerontology research on anti-aging interventions with drugs could be an answer to age-related diseases, aiming at closing the gap between lifespan...
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Stem and root assessment in mangrove forests using a low-cost, rapid-scan terrestrial laser scanner
Accurate assessment of forest structure and biomass is hampered by extensive field measurements that are time-consuming, costly, and inefficient....
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RT-IVT method allows multiplex real-time quantification of in vitro transcriptional mRNA production
For the past 30 years, in vitro transcription (IVT) technology has been extensively used for RNA production or for basic transcriptional mechanism...
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Rapid and reliable method for identification of three medium-sized horseshoe bat species in Europe
Accurate species identification is crucial for ecological research and effective wildlife management. Advances in molecular genetic tools enable...
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Immunoblot Analysis from Single Cells Using Milo™ Single-Cell Western Platform
In this new era of precision medicine, characterization of single-cell subpopulations to better understand disease etiology is paramount. It is thus...
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A Method for Processing Digital Images of Colorimetric Biochips for Quantitative Determination of Bacterial Antibiotic Resistance Genes
Methods of molecular genetic analysis based on the colorimetric biochip technology have shown their effectiveness in identifying antibiotic...
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Single-base resolution map** of 2′-O-methylation sites by an exoribonuclease-enriched chemical method
2′-O-methylation (Nm) is one of the most abundant RNA epigenetic modifications and plays a vital role in the post-transcriptional regulation of gene...
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NFI as Open Data Method
In the information age, there is an increasing trend towards open data, which is why there is a growing demand for NFI data to be available to...
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Using Cameras for Precise Measurement of Two-Dimensional Plant Features: CASS
Images are used frequently in plant phenoty** to capture measurements. This chapter offers a repeatable method for capturing two-dimensional...
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Leaf orientation measurement in a mixed hemiboreal broadleaf forest stand using terrestrial laser scanner
Orientation of leaves in a mature hemiboreal mixed broadleaf stand (the Järvselja RAMI birch stand) was measured using the high-density point cloud...
