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  1. Comparative analysis of parametric and non-parametric statistics for grain yield stability in rice (Oryza sativa L.)

    Basmati rice is an important cereal crop occupying a unique position in Indian agriculture. More than 90% of global rice is produced and consumed in...

    Hari Kesh, Khushi Ram Battan, Mujahid Khan in Vegetos
    Article 09 February 2024
  2. A fast non-parametric test of association for multiple traits

    The increasing availability of multidimensional phenotypic data in large cohorts of genotyped individuals requires efficient methods to identify...

    Diego Garrido-Martín, Miquel Calvo, ... Roderic Guigó in Genome Biology
    Article Open access 12 October 2023
  3. Non-parametric synergy modeling of chemical compounds with Gaussian processes

    Background

    Understanding the synergetic and antagonistic effects of combinations of drugs and toxins is vital for many applications, including...

    Yuliya Shapovalova, Tom Heskes, Tjeerd Dijkstra in BMC Bioinformatics
    Article Open access 06 January 2022
  4. Bayesian non-parametric detection heterogeneity in ecological models

    Detection heterogeneity is inherent to ecological data, arising from factors such as varied terrain or weather conditions, inconsistent sampling...

    Daniel Turek, Claudia Wehrhahn, Olivier Gimenez in Environmental and Ecological Statistics
    Article 22 March 2021
  5. A direct approach of causal detection for agriculture related variables via spatial and temporal non-parametric analysis

    Understanding the causality between biological variables or their related variables is beneficial in environmental or biological policy making. The...

    Article 06 February 2024
  6. Rooting of forest species mini-cuttings: an application of non-parametric survival analysis

    The adventitious rooting of mini-cuttings with less time spent in the greenhouse is a desired step in plant production in forestry companies. This...

    Marciel Lelis Duarte, Sebastião Martins Filho, ... Aloisio Xavier in New Forests
    Article 13 January 2023
  7. SPARK-X: non-parametric modeling enables scalable and robust detection of spatial expression patterns for large spatial transcriptomic studies

    Spatial transcriptomic studies are becoming increasingly common and large, posing important statistical and computational challenges for many...

    Jiaqiang Zhu, Shiquan Sun, **ang Zhou in Genome Biology
    Article Open access 21 June 2021
  8. Non-parametric and semi-parametric support estimation using SEquential RESampling random walks on biomolecular sequences

    Non-parametric and semi-parametric resampling procedures are widely used to perform support estimation in computational biology and bioinformatics....

    Wei Wang, Jack Smith, ... Kevin J. Liu in Algorithms for Molecular Biology
    Article Open access 16 April 2020
  9. A transformer model for cause-specific hazard prediction

    Backgroud

    Modelling discrete-time cause-specific hazards in the presence of competing events and non-proportional hazards is a challenging task in...

    Matthieu Oliver, Nicolas Allou, ... Cyril Ferdynus in BMC Bioinformatics
    Article Open access 03 May 2024
  10. Rethinking model-based and model-free influences on mental effort and striatal prediction errors

    A standard assumption in neuroscience is that low-effort model-free learning is automatic and continuously used, whereas more complex model-based...

    Carolina Feher da Silva, Gaia Lombardi, ... Todd A. Hare in Nature Human Behaviour
    Article 03 April 2023
  11. Model Building

    This introductory chapter is about fundamental ideas involved in model selection such as between a model-based or design-based approach, or a...
    George A. F. Seber, Matthew R. Schofield in Estimating Presence and Abundance of Closed Populations
    Chapter 2023
  12. Feasibility in MacArthur’s consumer-resource model

    Finding the conditions that ensure the survival of species has occupied ecologists for decades. Theoretically, for mechanistic models such as...

    Andrea Aparicio, Tong Wang, ... Yang-Yu Liu in Theoretical Ecology
    Article 22 July 2023
  13. A three-dimensional model of terrain-induced updrafts for movement ecology studies

    Background

    Spatially explicit simulation models of animal movements through the atmosphere necessarily require a representation of the spatial and...

    Regis Thedin, David Brandes, ... Charles Tripp in Movement Ecology
    Article Open access 28 March 2024
  14. The therapeutic potential of Camel Wharton jelly mesenchymal stem cells (CWJ-MSCs) in canine chronic kidney disease model

    Background

    Chronic kidney disease (CKD) is a worldwide health problem that its incidence increases nowadays with the increase in the risk of...

    Hala M. F. El Miniawy, Haithem A. Farghali, ... Tahany A. Ismail in Stem Cell Research & Therapy
    Article Open access 30 July 2022
  15. The teaching of evolutionary theory and the Cosmos–Evidence–Ideas model

    Evolutionary theory (ET), as many researchers have pointed out, is one of the cornerstones of Biology, whose understanding facilitates the study of...

    Ntinolazou Christina, Papadopoulou Penelope in Evolution: Education and Outreach
    Article Open access 28 March 2024
  16. On a population model with density dependence and Allee effect

    We study the dynamics of a discrete model with two different stages of the population, the pre-adult stage governed by a Beverton–Holt-type map and...

    J. S. Cánovas, M. Muñoz-Guillermo in Theory in Biosciences
    Article 02 October 2023
  17. A model of conceptual bootstrap** in human cognition

    To tackle a hard problem, it is often wise to reuse and recombine existing knowledge. Such an ability to bootstrap enables us to grow rich mental...

    Bonan Zhao, Christopher G. Lucas, Neil R. Bramley in Nature Human Behaviour
    Article Open access 16 October 2023
  18. Robust variable selection with exponential squared loss for the partially linear varying coefficient spatial autoregressive model

    The partially linear varying coefficient spatial autoregressive model is a semi-parametric spatial autoregressive model in which the coefficients of...

    Jialei Yu, Yunquan Song, Jiang Du in Environmental and Ecological Statistics
    Article 13 February 2024
  19. StackDPP: a stacking ensemble based DNA-binding protein prediction model

    Background

    DNA-binding proteins (DNA-BPs) are the proteins that bind and interact with DNA. DNA-BPs regulate and affect numerous biological processes,...

    Sheikh Hasib Ahmed, Dibyendu Brinto Bose, ... M Saifur Rahman in BMC Bioinformatics
    Article Open access 14 March 2024
  20. A mathematical model with uncertainty quantification for allelopathy with applications to real-world data

    We revisit a deterministic model for studying the dynamics of allelopathy. The model is formulated in terms of a non-homogeneous linear system of...

    Vicente J. Bevia, Juan-Carlos Cortés, ... Rafael-Jacinto Villanueva in Environmental and Ecological Statistics
    Article Open access 17 April 2024
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