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  1. Multi-Omics Databases

    The omics technology has been increasingly used in medical research since the emergence of the next-generation sequencing technology and big data...
    Hania AlOmari, Abedalrhman Alkhateeb, Bassam Hammo in Machine Learning Methods for Multi-Omics Data Integration
    Chapter 2024
  2. TMO-Net: an explainable pretrained multi-omics model for multi-task learning in oncology

    Cancer is a complex disease composing systemic alterations in multiple scales. In this study, we develop the Tumor Multi-Omics pre-trained Network...

    Feng-ao Wang, Zhenfeng Zhuang, ... Yixue Li in Genome Biology
    Article Open access 06 June 2024
  3. Web-based multi-omics integration using the Analyst software suite

    The growing number of multi-omics studies demands clear conceptual workflows coupled with easy-to-use software tools to facilitate data analysis and...

    Jessica D. Ewald, Guangyan Zhou, ... Jianguo **a in Nature Protocols
    Article 14 February 2024
  4. Multi-omics and Its Clinical Application

    With the rise of the severity of diseases the need to devise a predictive mechanism that ensures early and precise detection has increased. To...
    Ramneet Kaur, Dibita Mandal, ... Ajay Kumar in Multi-Omics Analysis of the Human Microbiome
    Chapter 2024
  5. Technology for Studying Multi-omics

    The transformation and advancements over the recent decade in technology have undoubtedly reshaped and revolutionized insight as well as the research...
    Truong Pham Thanh, Yen-Vy Nguyen Thi, Dinh-Toi Chu in Multi-Omics Analysis of the Human Microbiome
    Chapter 2024
  6. Deciphering spatial domains from spatial multi-omics with SpatialGlue

    Advances in spatial omics technologies now allow multiple types of data to be acquired from the same tissue slice. To realize the full potential of...

    Yahui Long, Kok Siong Ang, ... **miao Chen in Nature Methods
    Article Open access 21 June 2024
  7. The technological landscape and applications of single-cell multi-omics

    Single-cell multi-omics technologies and methods characterize cell states and activities by simultaneously integrating various single-modality omics...

    Alev Baysoy, Zhiliang Bai, ... Rong Fan in Nature Reviews Molecular Cell Biology
    Article 06 June 2023
  8. Multi-omics integration identifies regulatory factors underlying bovine subclinical mastitis

    Background

    Mastitis caused by multiple factors remains one of the most common and costly disease of the dairy industry. Multi-omics approaches enable...

    Mengqi Wang, Naisu Yang, ... Eveline M. Ibeagha-Awemu in Journal of Animal Science and Biotechnology
    Article Open access 14 March 2024
  9. Multi-Omics Analysis of the Human Microbiome From Technology to Clinical Applications

    This book introduces the rapidly evolving field of multi-omics in understanding the human microbiome. The book focuses on the technology used to...

    Indra Mani, Vijai Singh
    Book 2024
  10. Single Cell Atlas: a single-cell multi-omics human cell encyclopedia

    Single-cell sequencing datasets are key in biology and medicine for unraveling insights into heterogeneous cell populations with unprecedented...

    Lu Pan, Paolo Parini, ... Xuexin Li in Genome Biology
    Article Open access 19 April 2024
  11. MOCAT: multi-omics integration with auxiliary classifiers enhanced autoencoder

    Background

    Integrating multi-omics data is emerging as a critical approach in enhancing our understanding of complex diseases. Innovative...

    **aohui Yao, **aohan Jiang, ... Shan Cong in BioData Mining
    Article Open access 05 March 2024
  12. Multi-omics in Viral Microbiome

    The human virus microbiome, also known as the human virome, comprises the viruses that reside on or within the human body, either as pathogens or as...
    Maha AlKhazindar, Waled Morsy El-Senousy, Yasmein Abuhadema in Multi-Omics Analysis of the Human Microbiome
    Chapter 2024
  13. Multi-omics in Study of Oral Microbiome

    Dental health and disease correlate with the ability of oral microbes to compose and perform their functions, along with interactions between...
    Duy Ha Nguyen, Dinh-Toi Chu in Multi-Omics Analysis of the Human Microbiome
    Chapter 2024
  14. Multi-omics data integration using ratio-based quantitative profiling with Quartet reference materials

    Characterization and integration of the genome, epigenome, transcriptome, proteome and metabolome of different datasets is difficult owing to a lack...

    Yuanting Zheng, Yaqing Liu, ... Leming Shi in Nature Biotechnology
    Article Open access 07 September 2023
  15. A semi-supervised approach for the integration of multi-omics data based on transformer multi-head self-attention mechanism and graph convolutional networks

    Background and objectives

    Comprehensive analysis of multi-omics data is crucial for accurately formulating effective treatment plans for complex...

    Jiahui Wang, Nanqing Liao, ... Bizhong Wei in BMC Genomics
    Article Open access 22 January 2024
  16. Multi-omics in Prospecting of Genes of Biotechnological Importance

    A novel multi-omics method combines the data sets from several omics grou**s such as genomics, transcriptomics, proteomics, metabolomics,...
    Priyancka Arora, Aakash Singh, Ajay Kumar in Multi-Omics Analysis of the Human Microbiome
    Chapter 2024
  17. Multi-omics in Study of Lung Microbiome

    The lung microbiome influences the pathophysiology of pulmonary diseases, including asthma, chronic obstructive pulmonary disease (COPD), and cystic...
    Dibakar Roy, Paramita Roy, Sudipto Saha in Multi-Omics Analysis of the Human Microbiome
    Chapter 2024
  18. Progress in single-cell multimodal sequencing and multi-omics data integration

    With the rapid advance of single-cell sequencing technology, cell heterogeneity in various biological processes was dissected at different omics...

    Xuefei Wang, **nchao Wu, ... Wenfei ** in Biophysical Reviews
    Article 15 July 2023
  19. Holomics - a user-friendly R shiny application for multi-omics data integration and analysis

    An organism’s observable traits, or phenotype, result from intricate interactions among genes, proteins, metabolites and the environment. External...

    Katharina Munk, Daria Ilina, ... Eva M. Molin in BMC Bioinformatics
    Article Open access 04 March 2024
  20. Classifying breast cancer subtypes on multi-omics data via sparse canonical correlation analysis and deep learning

    Background

    Classifying breast cancer subtypes is crucial for clinical diagnosis and treatment. However, the early symptoms of breast cancer may not be...

    Yiran Huang, **fan Zeng, Cheng Zhong in BMC Bioinformatics
    Article Open access 27 March 2024
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