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  1. Multivariate Longitudinal Microbiome Models

    Chapter 15 mainly introduced the glmmTMB, GLMMadaptive, and FZINBMM packages. However, all these three packages...
    Chapter 2023
  2. Linear Mixed-Effects Models for Longitudinal Microbiome Data

    Longitudinal microbiome data analysis can be categorized into two approaches: univariate longitudinal analysis and multivariate longitudinal...
    Chapter 2023
  3. Longitudinal phenotypic aging metrics in the Baltimore Longitudinal Study of Aging

    To define metrics of phenotypic aging, it is essential to identify biological and environmental factors that influence the pace of aging. Previous...

    Pei-Lun Kuo, Jennifer A. Schrack, ... Luigi Ferrucci in Nature Aging
    Article Open access 18 July 2022
  4. Purpose in life and slow walking speed: cross-sectional and longitudinal associations

    The present research examines the association between purpose in life – a component of well-being defined as the feeling that one’s life is...

    Angelina R. Sutin, Sabrina Cajuste, ... Antonio Terracciano in GeroScience
    Article 25 January 2024
  5. Persistent dyslipidemia increases the longitudinal changes in telomere length

    Background and aims

    Leukocyte telomere length (LTL) as a ‘biological clock’ of aging is closely related to human health, its association with an...

    **aowei Liu, Tao Ma, ... Yi Zhao in Lipids in Health and Disease
    Article Open access 18 October 2023
  6. An empirical measure of resilience explains individual differences in the effect of tau pathology on memory change in aging

    Accurately measuring resilience to preclinical Alzheimer’s disease (AD) pathology is essential to understanding an important source of variability in...

    Lindsey Dobyns, Kailin Zhuang, ... Theresa M. Harrison in Nature Aging
    Article 06 February 2023
  7. Organ of Corti vibrations are dominated by longitudinal motion in vivo

    Recent observations of sound-evoked vibrations of the cochlea’s sensory organ of Corti (ooC) using optical coherence tomography (OCT) have revealed...

    Sebastiaan W. F. Meenderink, Wei Dong in Communications Biology
    Article Open access 24 November 2022
  8. Associations between epigenetic aging and diabetes mellitus in a Swedish longitudinal study

    Diabetes mellitus type 2 (T2D) is associated with accelerated biological aging and the increased risk of onset of other age-related diseases....

    Daniel Wikström Shemer, Shayan Mostafaei, ... Sara Hägg in GeroScience
    Article Open access 27 June 2024
  9. APOEε4 potentiates amyloid β effects on longitudinal tau pathology

    The mechanisms by which the apolipoprotein E ε4 ( APOE ε4) allele influences the pathophysiological progression of Alzheimer’s disease (AD) are poorly...

    João Pedro Ferrari-Souza, Bruna Bellaver, ... Tharick A. Pascoal in Nature Aging
    Article 25 September 2023
  10. Longitudinal monitoring of the mouse brain reveals heterogenous network trajectories during aging

    The human aging brain is characterized by changes in network efficiency that are currently best captured through longitudinal resting-state...

    Özgün Özalay, Tomas Mediavilla, ... Fahad Sultan in Communications Biology
    Article Open access 20 February 2024
  11. Longitudinal fragility phenoty** contributes to the prediction of lifespan and age-associated morbidity in C57BL/6 and Diversity Outbred mice

    Aging studies in mammalian models often depend on natural lifespan data as a primary outcome. Tools for lifespan prediction could accelerate these...

    Alison Luciano, Laura Robinson, ... Gary A. Churchill in GeroScience
    Article Open access 27 June 2024
  12. coda4microbiome: compositional data analysis for microbiome cross-sectional and longitudinal studies

    Background

    One of the main challenges of microbiome analysis is its compositional nature that if ignored can lead to spurious results. Addressing the...

    M. Luz Calle, Meritxell Pujolassos, Antoni Susin in BMC Bioinformatics
    Article Open access 06 March 2023
  13. Longitudinal changes in the functional connectivity of individuals at risk of Alzheimer’s disease

    First-degree relatives of Alzheimer’s disease patients constitute a key population in the search for early markers. Our group identified functional...

    Alejandra García-Colomo, Alberto Nebreda, ... Fernando Maestú in GeroScience
    Article 04 January 2024
  14. Evaluation of longitudinal passive immunity transfer against lumpy skin disease virus in calves by different serological methods

    To implement effective lumpy skin disease (LSD) control measures, such as timely vaccination, particularly in calves and serological monitoring, it...

    Milena Samojlović, Tamaš Petrović, ... Sava Lazić in Veterinary Research Communications
    Article Open access 23 May 2024
  15. Long-term prognostic value of left atrial longitudinal strain in an elderly community-based cohort

    Despite the well-known importance of left atrial (LA) mechanics in diastolic function, data are scarce regarding the prognostic power of LA...

    Fjolla Zhubi Bakija, Zsolt Bagyura, ... Béla Merkely in GeroScience
    Article Open access 09 December 2022
  16. Serum neurofilament light and white matter characteristics in the general population: a longitudinal analysis

    Neurofilament light polypeptide (NfL) is a component of the neuronal cytoskeleton and particularly abundant in large-caliber axons. When axonal...

    Marco Hermesdorf, Niklas Wulms, ... Klaus Berger in GeroScience
    Article Open access 07 June 2023
  17. LACE 2.0: an interactive R tool for the inference and visualization of longitudinal cancer evolution

    Background

    Longitudinal single-cell sequencing experiments of patient-derived models are increasingly employed to investigate cancer evolution. In...

    Gianluca Ascolani, Fabrizio Angaroni, ... Alex Graudenzi in BMC Bioinformatics
    Article Open access 17 March 2023
  18. Speech connectedness predicts reading performance three months in advance: a longitudinal experiment

    Aiming to verify the predictive value of oral narrative structure on reading acquisition, we followed 253 children (first and second graders) during...

    Bárbara Malcorra, Marina Ribeiro, ... Natália Bezerra Mota in npj Science of Learning
    Article Open access 02 May 2024
  19. DeepMPM: a mortality risk prediction model using longitudinal EHR data

    Background

    Accurate precision approaches have far not been developed for modeling mortality risk in intensive care unit (ICU) patients. Conventional...

    Fan Yang, Jian Zhang, ... Quan Zou in BMC Bioinformatics
    Article Open access 14 October 2022
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