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  1. Plastid engineering using episomal DNA

    Key message

    Novel episomal systems have the potential to accelerate plastid genetic engineering for application in plant synthetic biology.

    ...
    Alessandro Occhialini, Scott C. Lenaghan in Plant Cell Reports
    Article 02 May 2023
  2. Heterologous Expression of Fungal Biosynthetic Pathways in Aspergillus nidulans Using Episomal Vectors

    Filamentous fungi produce a wide diversity of secondary metabolites, whose biosynthesis is encoded in biosynthetic gene clusters (BGCs). As novel...
    Indra Roux, Yit Heng Chooi in Engineering Natural Product Biosynthesis
    Protocol 2022
  3. Smc5/6 silences episomal transcription by a three-step function

    In addition to its role in chromosome maintenance, the six-membered Smc5/6 complex functions as a restriction factor that binds to and...

    Fabien Abdul, Aurélie Diman, ... Michel Strubin in Nature Structural & Molecular Biology
    Article 12 September 2022
  4. Reprogramming of human peripheral blood mononuclear cells into induced mesenchymal stromal cells using non-integrating vectors

    Mesenchymal stromal cells (MSCs) have great value in cell therapies. The MSC therapies have many challenges due to its inconsistent potency and...

    Wanqiu Chen, Chenguang Wang, ... Charles Wang in Communications Biology
    Article Open access 11 April 2023
  5. Tracing the fate of AAV vectors in the body

    Nerea Zabaleta, Irene Gil-Farina in Nature Biotechnology
    Article 27 November 2023
  6. Establishment of Capra hircus somatic cells and induction of pluripotent stem-like cells

    Capra hircus (goat) induced pluripotent stem cells (giPSCs) harbor enormous scientific value and contribute to cellular agriculture, animal cloning,...

    Anshuman Singh, Suraj Kumar Singh, ... Vinod Verma in In Vitro Cellular & Developmental Biology - Animal
    Article 28 December 2023
  7. Knockout and functional analysis of BSSS-related genes in Acremonium chrysogenum by novel episomal expression vector containing Cas9 and AMA1

    Objective

    The target sorB gene, related to sorbicillinoid production, and the free expression element, AMA1, were used to verify the methodological...

    Ling Liu, Zhen Chen, ... Ju Chu in Biotechnology Letters
    Article 08 May 2022
  8. Derivation of Induced Pluripotent Stem Cell (iPSC) Lines from Patient-Specific Peripheral Blood Mononuclear Cells (PBMC) Using Episomal Vectors

    Inherited retinal diseases (IRDs) are a diverse group of rare eye disorders, resulting in vision loss or blindness. The underlying reason is mutation...
    Vijay Bhaskar Reddy Konala, Swapna Nandakumar, ... Rajarshi Pal in Induced Pluripotent Stem Cells and Human Disease
    Protocol 2021
  9. Episomal Reprogramming of Human Peripheral Blood Mononuclear Cells into Pluripotency

    Peripheral blood is an easily accessible cell resource for reprogramming into pluripotency by episomal vectors. Here, we describe an approach for...
    Wei Wen, Tao Cheng, **ao-Bing Zhang in Nuclear Reprogramming
    Protocol 2021
  10. Efficient assembly of a synthetic attenuated SARS-CoV-2 genome in Saccharomyces cerevisiae using multi-copy yeast vectors

    Saccharomyces cerevisiae has been demonstrated to be an excellent platform for the multi-fragment assembly of large DNA constructs through its...

    Abhishek Kumar Singh, Harsh Goar, ... Anand Kumar Bachhawat in Journal of Genetics
    Article 01 February 2024
  11. Genome engineering with Cas9 and AAV repair templates generates frequent concatemeric insertions of viral vectors

    CRISPR–Cas9 paired with adeno-associated virus serotype 6 (AAV6) is among the most efficient tools for producing targeted gene knockins. Here, we...

    Fabian P. Suchy, Daiki Karigane, ... Hiromitsu Nakauchi in Nature Biotechnology
    Article 08 April 2024
  12. Clinical stage drugs targeting inhibitor of apoptosis proteins purge episomal Hepatitis B viral genome in preclinical models

    A major unmet clinical need is a therapeutic capable of removing hepatitis B virus (HBV) genome from the liver of infected individuals to reduce...

    Michelle P. Clark, Thao Huynh, ... Gregor Ebert in Cell Death & Disease
    Article Open access 23 June 2021
  13. Direct Reprogramming of Human Fibroblasts into Induced Neural Progenitor Cells Using Suicide Gene Embodied Episomal Vectors for Rapid Selection of Exogenous DNA-Free Cells

    Direct neural reprogramming involves a rapid conversion of somatic cells into neural cells without passing through the intermediate pluripotent...
    Minhyung Lee, Janghwan Kim, Rajesh Ambasudhan in Nuclear Reprogramming
    Protocol 2021
  14. Generation of Induced Pluripotent Stem Cell Line iTAF15Xsk4 from Fibroblasts of a Patient with Microdeletion at Xq24

    Abstract

    Differentiation of induced pluripotent stem cells (iPSCs) from patients and healthy donors allows in vitro study of genetic disorders. The...

    I. E. Pristyazhnyuk, N. I. Meshcheryakov, ... A. G. Menzorov in Russian Journal of Developmental Biology
    Article 01 December 2023
  15. Vectors: Guide to Gene Delivery Vehicles

    Cloning vector is a DNA molecule acting as a vehicle to introduce foreign DNA into a desired host cell. Cloning vector enables amplification, and...
    Shalmali Bivalkar, Rajeev Mehla, ... Nayana Patil in A Complete Guide to Gene Cloning: From Basic to Advanced
    Chapter 2022
  16. Integrated vector genomes may contribute to long-term expression in primate liver after AAV administration

    The development of liver-based adeno-associated virus (AAV) gene therapies is facing concerns about limited efficiency and durability of transgene...

    Jenny A. Greig, Kelly M. Martins, ... James M. Wilson in Nature Biotechnology
    Article Open access 06 November 2023
  17. Generation of Human iPSCs by Episomal Reprogramming of Skin Fibroblasts and Peripheral Blood Mononuclear Cells

    Human-induced pluripotent stem cells (iPSCs) can be generated from patient-specific somatic cells by forced expression of the transcription factors...
    Fabia Febbraro, Muwan Chen, Mark Denham in Nuclear Reprogramming
    Protocol 2021
  18. An Induced Pluripotent Stem Cell Line (ICGi023-A) Obtained from a Patient with Parkinson’s Disease Associated Polymorphisms in LRRK2 and PINK1 Genes

    Abstract

    Parkinson’s disease is a neurodegenerative disease, and genetic variants are known in only 5% of cases. Analysis of clinical exome of a...

    A. A. Malakhova, S. V. Pavlova, ... S. M. Zakian in Russian Journal of Developmental Biology
    Article 01 February 2023
  19. Generation of an Induced Pluripotent Stem Cell Line, ICGi042-A, by Reprogramming Peripheral Blood Mononuclear Cells from a Parkinson’s Disease Patient with c.1000G>A Mutation in the LRRK2 Gene

    Abstract

    The search for new polymorphisms associated with hereditary diseases is important for diagnostics and the study of the disease’s development...

    E. V. Grigor’eva, S. V. Pavlova, ... S. M. Zakian in Russian Journal of Developmental Biology
    Article 01 February 2023
  20. Genetic Engineering of Potato (Solanum tuberosum) Chloroplasts Using the Small Synthetic Plastome “Mini-Synplastome”

    In the rapidly expanding field of synthetic biology, chloroplasts represent attractive targets for installation of valuable genetic circuits in plant...
    Alessandro Occhialini, Alexander C. Pfotenhauer, ... Scott C. Lenaghan in Plant Genome Engineering
    Protocol 2023
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