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  1. Production and use of antigen tetramers to study antigen-specific B cells

    B cells generate antibodies that provide protection from infection, but also cause pathology in autoimmune and allergic conditions. Antigen-specific...

    Allyssa Phelps, Diego Pazos-Castro, ... Joshua F. E. Koenig in Nature Protocols
    Article 19 January 2024
  2. Recreation of an antigen-driven germinal center in vitro by providing B cells with phagocytic antigen

    Successful vaccines rely on activating a functional humoral immune response through the generation of class-switched high affinity immunoglobulins...

    Ana Martínez-Riaño, Pilar Delgado, ... Balbino Alarcón in Communications Biology
    Article Open access 20 April 2023
  3. Sequence-Based Nanobody-Antigen Binding Prediction

    Nanobodies (Nb) are monomeric heavy-chain fragments derived from heavy-chain only antibodies naturally found in Camelids and Sharks. Their...
    Usama Sardar, Sarwan Ali, ... Murray Patterson in Bioinformatics Research and Applications
    Conference paper 2023
  4. CyTOF Intracellular Cytokine Assays for Antigen-Specific T Cells

    T cells specific for a single antigen tend to be rare, even after expansion of memory cells. They are commonly detected by in vitro stimulation with...
    Dongxia Lin, Holden T. Maecker in Flow Cytometry Protocols
    Protocol 2024
  5. Neutrophils Are Atypical Antigen-Presenting Cells

    Abstract

    Neutrophils are the most numerous blood leukocytes and are the “first line” of defense against pathogens in the focus of inflammation, where...

    Article 01 June 2023
  6. Cytokine-armed dendritic cell progenitors for antigen-agnostic cancer immunotherapy

    Dendritic cells (DCs) are antigen-presenting myeloid cells that regulate T cell activation, trafficking and function. Monocyte-derived DCs pulsed...

    Ali Ghasemi, Amaia Martinez-Usatorre, ... Michele De Palma in Nature Cancer
    Article Open access 23 November 2023
  7. Antigen-Specific Immunotherapy for Allergic and Autoimmune Diseases Using Plant-Made Antigens

    Antigen-specific immunotherapy (AIT) is the only available potentially curative treatment that targets the cause of allergic or autoimmune diseases....
    Chapter 2024
  8. Extracellular domains of CARs reprogramme T cell metabolism without antigen stimulation

    Metabolism is an indispensable part of T cell proliferation, activation and exhaustion, yet the metabolism of chimeric antigen receptor (CAR)-T cells...

    Aliya Lakhani, **min Chen, ... Junyoung O. Park in Nature Metabolism
    Article 24 April 2024
  9. Extract antibody and antigen names from biomedical literature

    Background

    The roles of antibody and antigen are indispensable in targeted diagnosis, therapy, and biomedical discovery. On top of that, massive...

    Thuy Trang Dinh, Trang Phuong Vo-Chanh, ... Hoang Duc Nguyen in BMC Bioinformatics
    Article Open access 06 December 2022
  10. Identification and Characterization of Antigen-Specific T-Cells in Viral Infections

    Identification and characterization of CD8+ T-cells is important to determine their role in protecting and clearing viral infections. Here we provide...
    Darya Trubach, Konjit Getachew Muleta, ... Sunil Kumar Saini in Intracellular Pathogens
    Protocol 2024
  11. Methods of Machine Learning-Based Chimeric Antigen Receptor Immunological Synapse Quality Quantification

    Chimeric Antigen Receptor (CAR)-mediated immunotherapy shows promising results for refractory blood cancers. Currently, six CAR-T drugs have been...
    Julian Gan, Jong Hyun Cho, ... Dongfang Liu in The Immune Synapse
    Protocol Open access 2023
  12. DG-Affinity: predicting antigen–antibody affinity with language models from sequences

    Background

    Antibody-mediated immune responses play a crucial role in the immune defense of human body. The evolution of bioengineering has led the...

    Ye Yuan, Qushuo Chen, ... **aoyong Pan in BMC Bioinformatics
    Article Open access 13 November 2023
  13. Lipopolysaccharide O-antigen profiles of Helicobacter pylori strains from Southwest China

    Background

    Helicobacter pylori lipopolysaccharide (LPS) structures vary among strains of different geographic origin. The aim of this study was to...

    **aoqiong Tang, Peng Wang, ... Hong Li in BMC Microbiology
    Article Open access 22 November 2023
  14. The potential oncogenic effect of tissue-specific expression of JC polyoma T antigen in digestive epithelial cells

    JC polyoma virus (JCPyV), a ubiquitous polyoma virus that commonly infects people, is identified as the etiologic factor for progressive multifocal...

    Hua-chuan Zheng, Hang Xue, ... Zheng-guo Cui in Transgenic Research
    Article Open access 29 May 2023
  15. LncRNA Neat1 targets NonO and miR-128-3p to promote antigen-specific Th17 cell responses and autoimmune inflammation

    Long non-coding RNAs (lncRNAs) interaction with RNA-Binding proteins (RBPs) plays an important role in immunological processes. The generation of...

    Sisi Chen, Jiali Wang, ... Hong Nian in Cell Death & Disease
    Article Open access 16 September 2023
  16. Two-dimensional high-throughput on-cell screening of immunoglobulins against broad antigen repertoires

    Identifying high-affinity antibodies in human serum is challenging due to extremely low number of circulating B cells specific to the desired...

    Yakov A. Lomakin, Leyla A. Ovchinnikova, ... Alexander G. Gabibov in Communications Biology
    Article Open access 10 July 2024
  17. Zebularine potentiates anti-tumor immunity by inducing tumor immunogenicity and improving antigen processing through cGAS-STING pathway

    DNA methylation is an important epigenetic mechanism involved in the anti-tumor immune response, and DNA methyltransferase inhibitors (DNMTi) have...

    Yong Zhang, Heng Zhao, ... Qi Chen in Communications Biology
    Article Open access 16 May 2024
  18. Synergistic effect of chimeric antigen receptor modified with Bcl-2 on enhanced solid tumour targeting

    Engineered T cells expressing chimeric antigen receptors (CARs) have shown remarkable therapeutic effects on haematological malignancies. However,...

    **aoyan Wang, Guodong Liu, ... Feng Yu in Human Cell
    Article 15 June 2024
  19. Swarna Bhasma Induces Antigen-Presenting Abilities of Macrophages and Helps Antigen Experienced CD4+ T Cells to Acquire Th1 Phenotypes Against Leishmania donovani Antigens

    In leishmaniasis, the protective immunity is largely mediated by proinflammatory cytokine producing abilities of T cells and an efficient parasite...

    Shashi Saini, Anshul Anand, ... Rakesh K. Singh in Biological Trace Element Research
    Article 24 April 2023
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