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Genome-wide identification of SNPs associated with body weight in yak
BackgroundThe yak is the most important livestock in the Qinghai-Tibet Plateau, and body weight directly affects the economic values of yak. Up to...
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A linkage disequilibrium-based approach to position unmapped SNPs in crop species
BackgroundHigh-density SNP arrays are now available for a wide range of crop species. Despite the development of many tools for generating genetic...
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Develo** SNPs and Strategies for Genomic Analysis in Alfalfa
Continued advances in plant breeding require innovative breeding strategies such as marker-assisted selection and genomic selection. New technologies...
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A novel approach of kinship determination based on the physical length of genetically shared regions of chromosomes
BackgroundDetermination of genetic relatedness between individuals plays a crucial role in resolving numerous civil cases involving familial...
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Genome-wide SNPs detect fine-scale genetic structure in threatened populations of squirrel glider Petaurus norfolcensis
Australian arboreal mammals are experiencing significant population declines, particularly due to land clearing and resulting habitat fragmentation....
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Innovative Advances in Plant Genoty**
Over the past decade, advances in plant genoty** have been critical in enabling the identification of genetic diversity, in understanding...
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Development and Utilization of High-Density Genome-Wide SNP Array for Tea Plants
Tea is a popular beverage with a high nutritional and economic value. Tea plants are diploid and have 15 pairs of homologous chromosomes, containing...
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GWABLUP: genome-wide association assisted best linear unbiased prediction of genetic values
BackgroundSince the very beginning of genomic selection, researchers investigated methods that improved upon SNP-BLUP (single nucleotide polymorphism...
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Genetic diversity and population structure of modern wheat (Triticum aestivum L.) cultivars in Henan Province of China based on SNP markers
BackgroundHenan is the province with the greatest wheat production in China. Although more than 100 cultivars are used for production, many cultivars...
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The hazards of genotype imputation when map** disease susceptibility variants
BackgroundThe cost-free increase in statistical power of using imputation to infer missing genotypes is undoubtedly appealing, but is it hazard-free?...
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Genome-wide screening for genetic variants in polyadenylation signal (PAS) sites in mouse selection lines for fatness and leanness
Alternative polyadenylation (APA) determines mRNA stability, localisation, translation and protein function. Several diseases, including obesity,...
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GWAS and bulked segregant analysis reveal the Loci controlling growth habit-related traits in cultivated Peanut (Arachis hypogaea L.)
BackgroundPeanut ( Arachis hypogaea L.) is a grain legume crop that originated from South America and is now grown around the world. Peanut growth...
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Single-Nucleotide Polymorphism
In forensic analysis, the conventional short tandem repeat (STR) markers are routinely used for examination of the biological samples. But, in the...
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Association of IGF1R polymorphisms with kidney function-related traits
BackgroundUnimpaired kidney function is important for maintaining a healthy state of homeostasis in the body. A genome-wide association study (GWAS)...
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High throughput genoty** of structural variations in a complex plant genome using an original Affymetrix® axiom® array
BackgroundInsertions/deletions (InDels) and more specifically presence/absence variations (PAVs) are pervasive in several species and have strong...
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First-degree relationships and genoty** errors deciphered by a high-density SNP array in a Duroc × Iberian pig cross
BackgroundTwo individuals with a first-degree relationship share about 50 percent of their alleles. Parent–offspring relationships cannot be...
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Genome-wide association map** for LLS resistance in a MAGIC population of groundnut (Arachis hypogaea L.)
Key messageThe identified 30 functional nucleotide polymorphisms or genic SNP markers would offer essential information for marker-assisted breeding...
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High-Performance Framework to Analyze Microarray Data
Pharmacogenomics is an important research field that studies the impact of genetic variation of patients on drug responses, looking for correlations...
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The KL genetic polymorphisms Associated with type 2 diabetes Mellitus
Growing number of research studies have shown that an anti-ageing gene Klotho ( KL ) is closely associated with Type 2 Diabetes Mellitus (T2DM). In...
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Exploring the potential of incremental feature selection to improve genomic prediction accuracy
BackgroundThe ever-increasing availability of high-density genomic markers in the form of single nucleotide polymorphisms (SNPs) enables genomic...
