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Showing 1-20 of 6,958 results
  1. Biological role of the major AP (abasic site) endonuclease of an archaeon from geothermal environments

    Archaea and bacteria in geothermal environments are predicted to suffer DNA depurination in vivo at high rates, which raises questions regarding the...

    Rupal Jain, Dennis W. Grogan in Extremophiles
    Article 02 December 2022
  2. Biochemical Assessment of the Mutant Sliding β-Clamp on Stimulation of Endonuclease IV from Staphylococcus aureus

    Staphylococcus aureus is a pathogenic bacterium that causes various infections in humans. The emergence of methicillin-resistant Staphylococcus aureus ...

    Ulan Zein, Aigerim Turgimbayeva, Sailau Abeldenov in Indian Journal of Microbiology
    Article 02 January 2024
  3. The activity of yeast Apn2 AP endonuclease at uracil-derived AP sites is dependent on the major carbon source

    Yeast Apn2 is an AP endonuclease and DNA 3′-diesterase that belongs to the Exo III family with homology to the E. coli exonuclease III, Schizosaccharom...

    Kasey Stokdyk, Alexandra Berroyer, ... Nayun Kim in Current Genetics
    Article 01 January 2021
  4. Effect of DNA Methylation on the 3′→5′ Exonuclease Activity of Major Human Abasic Site Endonuclease APEX1

    Abstract

    Apurinic/apyrimidinic (AP) endonucleases are the key enzymes in the DNA base excision repair, as they hydrolyze the phosphodiester bond in...

    Anton V. Endutkin, Darya D. Yatsenko, Dmitry O. Zharkov in Biochemistry (Moscow)
    Article 19 January 2022
  5. A unique DNA-binding mode of African swine fever virus AP endonuclease

    African swine fever virus (ASFV) is highly contagious and can cause lethal disease in pigs. ASFV is primarily replicated in the cytoplasm of pig...

    Yiqing Chen, ** Chen, ... Jianhua Gan in Cell Discovery
    Article Open access 17 March 2020
  6. Biochemical and functional characterization of an endonuclease III from Thermococcus barophilus Ch5

    Endonuclease III (EndoIII) is a bifunctional DNA glycosylase that is essential to excise thymine glycol (Tg) from DNA. Although EndoIII is widespread...

    Chengxuan Tang, Donghao Jiang, Likui Zhang in World Journal of Microbiology and Biotechnology
    Article 25 June 2022
  7. Characterization of Recombinant Endonuclease IV from Mycobacterium tuberculosis

    Abstract

    Mycobacterium tuberculosis cells contain two apurinic/apyrimidinic (AP) endonucleases, endonuclease IV (MtbEnd) and exonuclease III...

    M. A. Dymova, A. V. Endutkin, ... D. O. Zharkov in Molecular Biology
    Article 01 March 2021
  8. 5'-Deoxyribose Phosphate Lyase Activity of Apurinic/Apyrimidinic Endonuclease 1

    Abstract

    One of the most common DNA lesions is the appearance of apurinic/apyrimidinic (AP-) sites. The main repair pathway for AP sites is initiated...

    E. S. Ilina, O. I. Lavrik, S. N. Khodyreva in Molecular Biology
    Article 01 March 2021
  9. The APE1/REF-1 and the hallmarks of cancer

    APE1/REF-1 (apurinic/apyrimidinic endonuclease 1 / redox factor-1) is a protein with two domains, with endonuclease function and redox activity. Its...

    Priscyanne Barreto Siqueira, Mariana Moreno de Sousa Rodrigues, ... Andre Luiz Mencalha in Molecular Biology Reports
    Article 02 January 2024
  10. DNA Probes for Analysis of the Activity of Key Enzymes of the Base Excision DNA Repair Pathway in Human Cells

    Abstract —The important role of DNA damage in the occurrence of various diseases, including cancer, has led to study of the mechanisms of genetic...

    I. V. Alekseeva, A. A. Kuznetsova, ... N. A. Kuznetsov in Molecular Biology
    Article 26 April 2023
  11. AP endonuclease 1 (Apex1) influences brain development linking oxidative stress and DNA repair

    Brain and neurons are particularly sensitive to reactive oxygen species (ROS). Oxidative damage from ROS results in increased 8-oxoguanine in DNA...

    De-Sheng Pei, Pan-Pan Jia, ... Phyllis R. Strauss in Cell Death & Disease
    Article Open access 25 April 2019
  12. Mutational and Kinetic Analysis of APE1 Endoribonuclease Activity

    Abstract

    Human apurinic/apyrimidinic endonuclease 1 (APE1) participates in the DNA repair system. It is believed that the main biological function of...

    A. A. Kuznetsova, A. A. Gavrilova, ... N. A. Kuznetsov in Molecular Biology
    Article 01 March 2021
  13. Affinity Purification of Intraflagellar Transport (IFT) Proteins in Mice Using Endogenous Streptavidin/FLAG Tags

    Biological complexity is achieved through elaborate interactions between relatively few individual components. Affinity purification (AP) has allowed...
    Tina Beyer, Tiago Martins, ... Dagan Jenkins in Cilia
    Protocol 2024
  14. Common occurrence of hotspots of single strand DNA breaks at transcriptional start sites

    Background

    We recently developed two high-resolution methods for genome-wide map** of two prominent types of DNA damage, single-strand DNA breaks...

    Huifen Cao, Yufei Zhang, ... Philipp Kapranov in BMC Genomics
    Article Open access 15 April 2024
  15. Influence of the Poly(ADP-Ribose) Polymerase 1 Level on the Status of Base Excision Repair in Human Cells

    Abstract

    Base excision repair (BER) is aimed at repair of damaged bases, which are the largest group of DNA lesions. The main steps of BER are...

    E. S. Ilina, A. S. Kochetkova, ... S. N. Khodyreva in Molecular Biology
    Article 26 April 2023
  16. Gene editing with ‘pencil’ rather than ‘scissors’ in human pluripotent stem cells

    Owing to the advances in genome editing technologies, research on human pluripotent stem cells (hPSCs) have recently undergone breakthroughs that...

    Ju-Chan Park, Mihn Jeong Park, ... Hyuk-** Cha in Stem Cell Research & Therapy
    Article Open access 20 June 2023
  17. Identification, cloning and characterization of AcMSH1 from Onion (Allium cepa L.)

    Background

    MSH1 (MutS homolog1) is a nuclear-encoded protein that plays a crucial role in maintaining low mutation rates and stability of the...

    Pawan Mainkar, Tushar Kashinath Manape, ... Sivalingam Anandhan in Molecular Biology Reports
    Article 29 April 2023
  18. Small-molecule inhibition of APE1 induces apoptosis, pyroptosis, and necroptosis in non-small cell lung cancer

    Apurinic/apyrimidinic endonuclease 1 (APE1) plays a critical role in the base excision repair (BER) pathway, which is responsible for the excision of...

    Kaili Long, Lili Gu, ... Zhigang Hu in Cell Death & Disease
    Article Open access 18 May 2021
  19. APEX1 Nuclease and Redox Functions are Both Essential for Adult Mouse Hematopoietic Stem and Progenitor Cells

    Self-renewal and differentiation of hematopoietic stem and progenitor cells (HSPCs) are carefully controlled by extrinsic and intrinsic factors, to...

    Samantha Zaunz, Jonathan De Smedt, ... Catherine Verfaillie in Stem Cell Reviews and Reports
    Article Open access 02 June 2023
  20. Pirh2 modulates the mitochondrial function and cytochrome c-mediated neuronal death during Alzheimer’s disease

    Pirh2 is an E3 ubiquitin ligase known to regulate the DNA damage responses through ubiquitylation of various participating signaling factors. DNA...

    Abhishek Singh, Shubhangini Tiwari, Sarika Singh in Cell Death & Disease
    Article Open access 13 May 2024
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