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  1. Efficient and high-fidelity base editor with expanded PAM compatibility for cytidine dinucleotide

    Cytidine base editor (CBE), which is composed of a cytidine deaminase fused to Cas9 nickase, has been widely used to induce C-to-T conversions in a...

    Zhiquan Liu, Siyu Chen, ... Zhanjun Li in Science China Life Sciences
    Article 06 January 2021
  2. Legal aspects of privacy-enhancing technologies in genome-wide association studies and their impact on performance and feasibility

    Genomic data holds huge potential for medical progress but requires strict safety measures due to its sensitive nature to comply with data protection...

    Alissa Brauneck, Louisa Schmalhorst, ... Gabriele Buchholtz in Genome Biology
    Article Open access 13 June 2024
  3. Plant Microbiome-Based Genome-Wide Association Studies

    Plants form intimate associations with microorganisms, and these associations are directly impacted by the host genotype. However, identifying...
    Siwen Deng, Michael A. Meier, ... Devin Coleman-Derr in Genome-Wide Association Studies
    Protocol 2022
  4. A range-wide analysis of population structure and genomic variation within the critically endangered spiny daisy (Acanthocladium dockeri)

    Understanding population structure and genetic diversity is important for designing effective conservation strategies. As a critically endangered...

    Elodie Brooks, Amy L Slender, ... James CR Stangoulis in Conservation Genetics
    Article Open access 30 August 2022
  5. A low-input high resolution sequential chromatin immunoprecipitation method captures genome-wide dynamics of bivalent chromatin

    Background

    Bivalent chromatin is an exemplar of epigenetic plasticity. This co-occurrence of active-associated H3K4me3 and inactive-associated...

    Janith A. Seneviratne, William W. H. Ho, ... Melanie A. Eckersley-Maslin in Epigenetics & Chromatin
    Article Open access 10 February 2024
  6. Reproductive Compatibility of European Populations of Two Species of Ulnaria (Bacillariophyta)

    Abstract—

    Clones of two morphotypes corresponding to two species of pennate araphid diatoms, Ulnaria ulna and U. acus , were isolated from samples...

    Y. A. Podunay, O. I. Davidovich, N. A. Davidovich in Moscow University Biological Sciences Bulletin
    Article 01 April 2021
  7. Identification, pathogenesis and compatibility of Aschersonia aleyrodis (Webber) with selected fungicides and insecticides

    Naturally, citrus blackfly mycosis nymphs were observed in citrus orchard in the vicinity of Vidarbha region of Maharashtra and the fungus colony...

    Y. V. Ingle, D. N. Bhosale, ... A. K. Sadawarte in International Journal of Tropical Insect Science
    Article 26 February 2022
  8. Compatibility of a biopesticide based on the yeast Rhodotorula mucilaginosa (Lv316) with chemical fungicides used in blackberry crops

    Blackberry ( Rubus glaucus Benth.) is affected by several diseases, such as grey mould ( Botrytis cinerea Pers.), downy mildew ( Peronospora sp.) and...

    L. Uribe-Gutiérrez, C. A. Moreno-Velandia, L. F. Villamizar in BioControl
    Article 19 October 2021
  9. Compatibility of soil application of Metarhizium brunneum and cover crops against Ceratitis capitata soil-dwelling stages

    Fruit fly ground-dwelling stages (late third instar larvae, pupae, and teneral adults) are susceptible to predation from generalist ground-dwelling...

    JoaquĂ­n Cruz-Miralles, Inmaculada Garrido-Jurado, ... Josep A. Jaques in Journal of Pest Science
    Article Open access 13 January 2024
  10. Minimal genome-wide human CRISPR-Cas9 library

    CRISPR guide RNA libraries have been iteratively improved to provide increasingly efficient reagents, although their large size is a barrier for many...

    Emanuel Gonçalves, Mark Thomas, ... Mathew J. Garnett in Genome Biology
    Article Open access 21 January 2021
  11. Genome-wide association analysis and transgenic characterization for amylose content regulating gene in tuber of Dioscorea zingiberensis

    Background

    Amylose, a prebiotic found in yams is known to be beneficial for the gut microflora and is particularly advantageous for diabetic patients’...

    Shixian Sun, Binbin Guan, ... Yunpeng Luan in BMC Plant Biology
    Article Open access 10 June 2024
  12. LUSTR: a new customizable tool for calling genome-wide germline and somatic short tandem repeat variants

    Background

    Short tandem repeats (STRs) are widely distributed across the human genome and are associated with numerous neurological disorders....

    **feng Lu, Camilo Toro, ... Erin L. Heinzen in BMC Genomics
    Article Open access 26 January 2024
  13. Genetic diversity and population structure analyses and genome-wide association studies of photoperiod sensitivity in cotton (Gossypium hirsutum L.)

    Key message

    Genetic diversity and population structure analyses showed progressively narrowed diversity in US Upland cotton compared to land races....

    S. Anjan Gowda, Fred M. Bourland, ... Vasu Kuraparthy in Theoretical and Applied Genetics
    Article 24 October 2023
  14. Compatibility of entomopathogenic nematodes with insecticides against the cabbage white butterfly, Pieris rapae L. (Lepidoptera: Pieridae)

    Background

    Compatibility of entomopathogenic nematodes (EPNs) with insecticides is a crucial mainstay of integrated pest management (IPM) programs....

    Ahmed A. A. Aioub, Ramadan M. El-Ashry, ... Ahmed E. A. Elsobki in Egyptian Journal of Biological Pest Control
    Article Open access 15 December 2021
  15. Glycine max NNL1 restricts symbiotic compatibility with widely distributed bradyrhizobia via root hair infection

    Symbiosis between soybean ( Glycine max ) and rhizobia is essential for efficient nitrogen fixation. Rhizobial effectors secreted through the type-III...

    Bao Zhang, Mengdi Wang, ... Xuelu Wang in Nature Plants
    Article 15 January 2021
  16. Pangenome-Wide Association Study and Transcriptome Analysis Reveal a Novel QTL and Candidate Genes Controlling both Panicle and Leaf Blast Resistance in Rice

    Cultivating rice varieties with robust blast resistance is the most effective and economical way to manage the rice blast disease. However, rice...

    Jian Wang, Haifei Hu, ... Junliang Zhao in Rice
    Article Open access 12 April 2024
  17. Combining ability and gene action for sexual compatibility and pattern of nut colour segregation among ten elite clones of kola (Cola nitida (Vent) Schott and Endl.)

    Knowledge of combining ability and mode of inheritance is important in devising strategies to breed compatible and high yielding plant varieties....

    D. Nyadanu, S. T. Lowor, ... A. Ofori in Euphytica
    Article 18 March 2021
  18. Post-pollination endogenous phytohormone levels in reproductive organs in two interspecific Arachis crosses differing in compatibility

    Wild Arachis species are of great value to the genetic improvement of the cultivated peanut; however, incompatibility hinders the utilization of the...

    Jia Kai Li, Zhi Wei Wang, ... Chuan Tang Wang in Plant Growth Regulation
    Article 09 October 2022
  19. Genome-wide characterization of 2OGD superfamily for mining of susceptibility factors responding to various biotic stresses in Musa spp.

    Bananas are an important staple food and cash crop, but they are vulnerable to a variety of pests and diseases that substantially reduce yield and...

    Anuradha Chelliah, Chandrasekar Arumugam, ... Uma Subbaraya in Physiology and Molecular Biology of Plants
    Article 01 September 2023
  20. Genome-wide identification and characterization of the dof gene family in mango (Mangifera indica L.)

    DOF transcription factors are essential plant-specific gene regulators that are crucial in plant growth and stress responses. Mangifera indica , a...

    Suliman M. S. Alghanem, Ghalia S. H. Alnusairi, ... Mona H. Soliman in Genetic Resources and Crop Evolution
    Article 30 November 2023
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