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Multiple Sequence Alignment Algorithms in Bioinformatics
Bioinformatics is a fast-evolving topic today. It has useful from establishing phylogenetic trees, protein structure prediction to discovery of...
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Nature Inspired Algorithms for Solving Multiple Sequence Alignment Problem: A Review
Multiple Sequence Alignment (MSA) problem is considered an NP-hard problem due to its nature of alignment of more than three or more biological...
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Research on Genome Multiple Sequence Alignment Algorithm Based on Third Generation Sequencing
Long reads produced by the third-generation gene sequencing technology need to be aligned to the reference genome using a more advanced aligner. To...
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Progressive Multiple Sequence Alignment for COVID-19 Mutation Identification via Deep Reinforcement Learning
COVID-19 can mutate rapidly, resulting in new variants which could be more malignant. To recognize the new variant, we must identify the mutation...
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Develo** new genetic algorithm based on integer programming for multiple sequence alignment
Molecular biology advances in the past few decades have contributed to the rapid increase in genome sequencing of various organisms; sequence...
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Global Sequence Alignment
The sequence alignment problem is a generalization of the edit distance problem (see Levenshtein [4]), which measures the difference between two...
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An intelligent cloud robotics personalized medicine system by assessment of DNA and electronic health records using fuzzy-based progressive alignment sequence (F-Pas)
Treatment and prevention in the standard approach are focused on statistical averages rather than the unique needs of each individual. The...
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Snippet Generation Using Local Alignment for Information Retrieval (LAIR)
This paper proposes the method LAIR, which is an adaptation of the local sequence alignment method, commonly used in bioinformatics to identify...
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A method for multiple-sequence-alignment-free protein structure prediction using a protein language model
Protein structure prediction pipelines based on artificial intelligence, such as AlphaFold2, have achieved near-experimental accuracy. These advanced...
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Deep Learning Algorithms Comparison for Multiple Biological Sequences Alignment
In this paper, deep learning algorithms are compared for aligning multiple biological molecular sequences such as DNA, RNA, and protein. Efficient...
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Spatial Alignment
The alignmentAlignment of a road is three-dimensional and must therefore always be viewed spatially. However, the processing and presentation of the...
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Accurate and Fast Fire Alignment Method Based on a Mono-binocular Vision System
Obtaining 3D coordinates of fire by binocular vision is beneficial for intelligent fire extinguishing. However, binocular vision technology has a...
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Sequence Analysis
The collection and understanding of biological sequences once founded bioinformatics as a scientific field, and is still the most common reception...
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Complementary Preparation for Frame Alignment Algorithms Using PYNQ-Z2 FPGA
FPGAs have been known to run programs at a lower execution time due to its parallelism capabilities. Frame alignment algorithm is a type of sequence...
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Improved Initial Alignment Algorithm of SINS on Shaking Base Based on Kalman Filter
In the initial alignment of shaking base, Kalman filter is easy to diverge, and the alignment result is poor. Many scholars introduce various...
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The benefits, risks and bounds of personalizing the alignment of large language models to individuals
Large language models (LLMs) undergo ‘alignment’ so that they better reflect human values or preferences, and are safer or more useful. However,...
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The centered alignment multikernel nonhomogeneous gray model and its application
The gray model is very useful for small sample prediction. Compared with the homogeneous gray model, the nonhomogeneous gray model (NGM) improves the...
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Distribution analysis of deterministic clam** and positioning error for machining of ring-shaped workpieces considering alignment uncertainty
In the machining of aero-engine gearbox ring-shaped parts, deterministic positioning is often achieved by general fixtures combined with manual...
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A Fast Yaw Alignment Algorithm of Seaplane Based on LSTM Network
Initial alignment must be carried out before the formal operation of the airborne strapdown inertial navigation system (SINS) on seaplane. The...