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On the Simulation Power of Surface Chemical Reaction Networks
The Chemical Reaction Network (CRN) is a well-studied model that describes the interaction of molecules in well-mixed solutions. In 2014, Qian and...
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Rate-Independent Continuous Inhibitory Chemical Reaction Networks Are Turing-Universal
We study the model of continuous chemical reaction networks (CRNs), consisting of reactions such as...
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Computing Threshold Circuits with Bimolecular Void Reactions in Step Chemical Reaction Networks
Step Chemical Reaction Networks (step CRNs) are an augmentation of the Chemical Reaction Network (CRN) model where additional species may be...
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Universality of a surface chemical reaction network using only bi-molecular reactions
In recent years, a novel molecular computation model known as surface chemical reaction network (Qian, In: DNA computing and molecular programming:...
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Chemical reaction networks and opportunities for machine learning
Chemical reaction networks (CRNs), defined by sets of species and possible reactions between them, are widely used to interrogate chemical systems....
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Parallel Computations with DNA-Encoded Chemical Reaction Networks
Molecular programs use chemical reactions as primitives to process information. An interesting property of many of these amorphous systems is their...
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A Cellular Automaton Approach for Efficient Computing on Surface Chemical Reaction Networks
A surface chemical reaction network (sCRN, Qian and Winfree in DNA Computing and Molecular Programming: 20th International Conference, DNA 20, Kyoto,...
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Data-Driven Inference of Chemical Reaction Networks via Graph-Based Variational Autoencoders
We propose a data-driven machine learning framework that automatically infers an explicit representation of a Chemical Reaction Network (CRN)...
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Chemical Reaction Regular Grammars
We propose a new type of computing devices based on grammatical formulation augmented by multiset storages, called chemical reaction regular grammars...
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ALCH: An imperative language for chemical reaction network-controlled tile assembly
Schiefer and Winfree recently introduced the chemical reaction network-controlled tile assembly model (CRN-TAM), a variant of the abstract tile...
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Autonomous and Programmable Strand Generator Implemented as DNA and Enzymatic Chemical Reaction Cascade
Nanomechanical devices are driven by chemical and/or physical signals, which exert their functions by transitioning between different molecular...
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Maximum likelihood based estimation with quasi oppositional chemical reaction optimization algorithm for speech signal enhancement
In recent times, speech enhancement (SE) becomes a significant process in the field of speech signal processing. Since the speech signal in real time...
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A Study of a Metapopulation Model Using the Stochastic Reaction Diffusion Master Equation
Many biological systems involve both the noise in chemical reaction process and diffusion in space between the molecules involved in the reactions....
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A Multi-direction Prediction Multi-objective Hybrid Chemical Reaction Optimization Algorithm for Dynamic Multi-objective Optimization
The challenge of solving dynamic multi-objective optimization problems is to trace the varying Pareto optimal front and/or Pareto optimal set quickly...
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Population-induced phase transitions and the verification of chemical reaction networks
We show that very simple molecular systems, modeled as chemical reaction networks, can have behaviors that exhibit dramatic phase transitions at...
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ChEMU 2021: Reaction Reference Resolution and Anaphora Resolution in Chemical Patents
Chemical patents serve as an indispensable source of information about new discoveries of chemical compounds. The ChEMU (Cheminformatics Elsevier...
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A hybrid algorithm based on modified chemical reaction optimization and best-first search algorithm for solving minimum vertex cover problem
The minimum vertex cover problem (MVCP) is one of the well-known NP-complete problems that can be used to formulate numerous real-life applications....
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Application of Polymer Composite Material Reaction Vessel with IoT Monitoring System
In most cases, precise polymer composite reaction vessels require a lot of human resources. In addition to monitoring whether the reaction process is...
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Variants of distributed reaction systems
A distributed reaction system consists of a finite set of reaction systems that either interact with a common environment or interact with each other...
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Nets with Mana: A Framework for Chemical Reaction Modelling
We use categorical methods to define a new flavor of Petri nets where transitions can only fire a limited number of times, specified by a quantity...