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ProFuMCell and ProModb: Web services for analyzing interaction-based functionally localized protein modules in a cell
AbstractThe modular organization of a cell which can be determined by its interaction network allows us to understand a mesh of cooperation among the...
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MAIP: a web service for predicting blood‐stage malaria inhibitors
Malaria is a disease affecting hundreds of millions of people across the world, mainly in develo** countries and especially in sub-Saharan Africa....
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ReMODE: a deep learning-based web server for target-specific drug design
Deep learning (DL) and machine learning contribute significantly to basic biology research and drug discovery in the past few decades. Recent...
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Web Services for RNA-RNA Interaction Prediction
Non-coding RNAs have various biological functions such as translational regulation, and RNA-RNA interactions play essential roles in the mechanisms...
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Atomevo: a web server combining protein modelling, docking, molecular dynamic simulation and MMPBSA analysis of Candida antarctica lipase B (CalB) fusion protein
Although current computational biology software is available and has prompted the development of enzyme–substrates simulation, they are difficult to...
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Fish cell line: depositories, web resources and future applications
Cell lines are important bioresources to study the key biological processes in the areas like virology, pathology, immunology, toxicology,...
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Web-Based Quantitative Structure–Activity Relationship Resources Facilitate Effective Drug Discovery
Traditional drug discovery effectively contributes to the treatment of many diseases but is limited by high costs and long cycles. Quantitative...
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Research trends and performance evaluation of natural gas in the web of science category of energy and fuels: a bibliometric study
This investigation deals with the bibliometric analysis of research trends and performances of Natural Gas (NG) in the Web of Science (WOS). Search...
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ChemSpectra: a web-based spectra editor for analytical data
ChemSpectra, a web-based software to visualize and analyze spectroscopic data, integrating solutions for infrared spectroscopy (IR), mass...
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Predicting target profiles with confidence as a service using docking scores
BackgroundIdentifying and assessing ligand-target binding is a core component in early drug discovery as one or more unwanted interactions may be...
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New algorithms demonstrate untargeted detection of chemically meaningful changing units and formula assignment for HRMS data of polymeric mixtures in the open-source constellation web application
The field of high-resolution mass spectrometry (HRMS) and ancillary hyphenated techniques comprise a rapidly expanding and evolving area. As...
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RoboLab: providing remote access to a physical radiochemistry laboratory for teaching and training
RoboLab enables students to perform real radiochemistry experiments without being physically present in a laboratory. Remotely controlled experiments...
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iOk Platform for Automatic Search and Analysis of Objects in Images Using Artificial Intelligence in the Study of Supported Catalysts
AbstractThe iOk platform was presented, which combines the ParticlesNN web service and the DLgram and No Code ML Telegram bots for automatic search...
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Biobanking IT Systems, Database Structure and Web Applications
The rising importance of biobanks for biomedical research cannot be overstated. They are expected to deliver a sustainable impact on research by...
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Design, implementation, and operation of a rapid, robust named entity recognition web service
Most BioCreative tasks to date have focused on assessing the quality of text-mining annotations in terms of precision and recall. Interoperability,...
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3DStructGen: an interactive web-based 3D structure generation for non-periodic molecule and crystal
BackgroundThe increasing number of organic and inorganic structures promotes the development of the “Big Data” in chemistry and material science, and...
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A Web-Based Method for the Identification of IL6-Based Immunotoxicity in Vaccine Candidates
Interleukin 6 (IL6) is a major pro-inflammatory cytokine that plays a pivotal role in both innate and adaptive immune responses. In the past, a...
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How can SHAP values help to shape metabolic stability of chemical compounds?
BackgroundComputational methods support nowadays each stage of drug design campaigns. They assist not only in the process of identification of new...
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Database of Intermediates of Enzyme-Catalyzed Chemical Reactions ENIAD
AbstractEnzymatic catalysis is characterized by multistage chemical reactions from enzyme-substrate complexes to products. In a number of cases, in...
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CAZymes-based ranking of fungi (CBRF): an interactive web database for identifying fungi with extrinsic plant biomass degrading abilities
Carbohydrate-active enzymes (CAZymes) are industrially important enzymes, which are involved in synthesis and breakdown of carbohydrates. CAZymes...
