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  1. Quantification of Site-Specific 5-Formylcytosine by Integrating Peptide Nucleic Acid-Clamped Ligation with Loop-Mediated Isothermal Amplification

    The precise sensing of 5-formylcytosine (5fC) is of great significance because 5fC not only determines the nucleosome organization that regulates...
    Zhenhao Zhang, Weimin Tian, ... Chenghui Liu in DNA Modification Detection Methods
    Protocol 2022
  2. Proximity Ligation Assay to Detect the Proximity Between Host Proteins and Viral Proteins of HIV-1

    The study of host-pathogen interaction often requires interrogating the protein-protein interactions and examining post-translational modifications...
    Sutanuka Chakraborty, Shobith Suresh, ... Udaykumar Ranga in HIV Protocols
    Protocol 2024
  3. Pylorus ligation-induced hyperacidity: synergistic prophylactic effects of linagliptin and L-arginine via up-regulation of EP4 receptor subtype and improvement of vascular endothelial damage

    Gastric hyperacidity and ulceration are chronic diseases characterized by repeated healing followed by re-exacerbation. The study aims to protect...

    Gihan F. Asaad, Dalia O. Saleh, ... Gehad Abdel Jaleel in Naunyn-Schmiedeberg's Archives of Pharmacology
    Article Open access 24 August 2023
  4. Detection of viral RNAs at ambient temperature via reporter proteins produced through the target-splinted ligation of DNA probes

    Nucleic acid assays are not typically deployable in point-of-care settings because they require costly and sophisticated equipment for the control of...

    Elizabeth A. Phillips, Adam D. Silverman, ... William J. Blake in Nature Biomedical Engineering
    Article Open access 04 May 2023
  5. Identification of two novel large deletions in FBN1 gene by next-generation sequencing and multiplex ligation-dependent probe amplification

    Background

    Mutations in fibrillin-1 ( FBN1 ) are known to be associated with Marfan syndrome (MFS), an autosomal dominant connective tissue disorder....

    **nxin Lu, Ren Wang, ... Yan’an Wu in BMC Medical Genomics
    Article Open access 05 February 2024
  6. Investigating the efficacy of dapsone in treating sepsis induced by cecal ligation and puncture surgery in male mice

    Sepsis is a life-threatening condition caused by the body’s response to an infection. Dapsone is a sulfone with antibiotic properties, and...

    Mohammad Shokati Sayyad, Ahmadreza Dehpour, ... Hamed Shafaroodi in Naunyn-Schmiedeberg's Archives of Pharmacology
    Article 28 June 2024
  7. Application of a Multiplex Ligation-Dependent Probe Amplification-Based Next-Generation Sequencing Approach for the Detection of Pathogenesis of Duchenne Muscular Dystrophy and Spinal Muscular Atrophy Caused by Copy Number Aberrations

    Both Duchenne muscular dystrophy (DMD; OMIM no. 310200) and spinal muscular atrophy (SMA; OMIM no. 253300/253550/253400/271150) are genetic disorders...

    Yongchen Yang, Chaoran **a, ... Peng Luo in Molecular Neurobiology
    Article Open access 19 August 2023
  8. Activation of Cannabinoid Receptor 1 in GABAergic Neurons in the Rostral Anterior Insular Cortex Contributes to the Analgesia Following Common Peroneal Nerve Ligation

    The rostral agranular insular cortex (RAIC) has been associated with pain modulation. Although the endogenous cannabinoid system (eCB) has been shown...

    Ming Zhang, Cong Li, ... Hui Xu in Neuroscience Bulletin
    Article Open access 11 February 2023
  9. Severe Combined Immunodeficiency from a Homozygous DNA Ligase 1 Mutant with Reduced Catalytic Activity but Increased Ligation Fidelity

    A cell’s ability to survive and to evade cancer is contingent on its ability to retain genomic integrity, which can be seriously compromised when...

    Huda Alajlan, Vlad-Stefan Raducanu, ... Anas M. Alazami in Journal of Clinical Immunology
    Article Open access 19 June 2024
  10. Implementing a novel capture and ligation probe-PCR method in mass screen and treatment to support malaria elimination efforts in the China-Myanmar border region

    Background

    Mass screening and treatment (MSAT) for malaria elimination lacks an ideal diagnostic tool to allow sensitive and affordable test of the...

    **ao-dong Sun, Ya-ling Zhao, ... Zhi Zheng in Malaria Journal
    Article Open access 19 January 2023
  11. Circular RNA Tmcc1 improves astrocytic glutamate metabolism and spatial memory via NF-κB and CREB signaling in a bile duct ligation mouse model: transcriptional and cellular analyses

    Background

    Hepatic encephalopathy-induced hyperammonemia alters astrocytic glutamate metabolism in the brain, which is involved in cognitive decline....

    Danbi Jo, Yeong-Hwan Lim, ... Juhyun Song in Journal of Neuroinflammation
    Article Open access 22 May 2023
  12. RedOx regulation of LRRK2 kinase activity by active site cysteines

    Mutations of the human leucine-rich repeat kinase 2 (LRRK2) have been associated with both, idiopathic and familial Parkinson’s disease (PD). Most of...

    Chiara R. Trilling, Jui-Hung Weng, ... Friedrich W. Herberg in npj Parkinson's Disease
    Article Open access 03 April 2024
  13. The ligation between ERMAP, galectin-9 and dectin-2 promotes Kupffer cell phagocytosis and antitumor immunity

    Kupffer cells, the liver tissue resident macrophages, are critical in the detection and clearance of cancer cells. However, the molecular mechanisms...

    Jie Li, **ao-gang Liu, ... Ji-hang Yuan in Nature Immunology
    Article 09 October 2023
  14. LUMI-PCR: an Illumina platform ligation-mediated PCR protocol for integration site cloning, provides molecular quantitation of integration sites

    Background

    Ligation-mediated PCR protocols have diverse uses including the identification of integration sites of insertional mutagens, integrating...

    Joanna C. Dawes, Philip Webster, ... Anthony G. Uren in Mobile DNA
    Article Open access 04 February 2020
  15. New Frontiers for Site-Directed RNA Editing: Harnessing Endogenous ADARs

    RNA editing activity can be exploited for the restoration of disease-causing nonsense and missense mutations and as a tool to manipulate the...
    Tobias Merkle, Thorsten Stafforst in RNA Editing
    Protocol 2021
  16. Addition of an affected family member to a previously ascertained autosomal recessive nonsyndromic hearing loss pedigree and systematic phenotype-genotype analysis of splice-site variants in MYO15A

    Pathogenic variants in MYO15A are known to cause autosomal recessive nonsyndromic hearing loss (ARNSHL), DFNB3. We have previously reported on one...

    **-Yuan Yang, Wei-Qian Wang, ... Pu Dai in BMC Medical Genomics
    Article Open access 18 November 2022
  17. An Improved Monkey Model of Myocardial Ischemic Infarction for Cardiovascular Drug Development

    Non-human primate monkey model of myocardial ischemic infarction is precious for translational medicine research. Ligation of the left anterior...

    Keke Wang, Pengfei Han, ... Y. James Kang in Cardiovascular Toxicology
    Article 23 June 2022
  18. Tau-proximity ligation assay reveals extensive previously undetected pathology prior to neurofibrillary tangles in preclinical Alzheimer’s disease

    Background

    Multimerization is a key process in prion-like disorders such as Alzheimer’s disease (AD), since it is a requirement for self-templating...

    Nora Bengoa-Vergniory, Elisavet Velentza-Almpani, ... Javier Alegre-Abarrategui in Acta Neuropathologica Communications
    Article Open access 28 January 2021
  19. A novel splice site variant c.1183 + 1 G > C in DFNA5 causing autosomal dominant nonsyndromic hearing loss in a Chinese family

    Background

    The most frequent clinical presentation of autosomal dominant nonsyndromic hearing loss (ADNSHL) is bilateral, symmetrical, postlingual...

    Qiong Li, Shujuan Wang, ... Dingjun Zha in BMC Medical Genomics
    Article Open access 21 July 2022
  20. Use of Toll-Like Receptor (TLR) Ligation to Characterize Human Regulatory B-Cells Subsets

    Toll-like receptors (TLRs) are pattern recognition receptors (PRRs), which constitute key components in the recognition of pathogens, thereby...
    Mathilde A. M. Chayé, Chiara Tontini, ... Hermelijn H. Smits in Regulatory B Cells
    Protocol 2021
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