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  1. Characterization of genomic DNA sequence of the candidate gene for FB_Mfu10 associated with fire blight resistance in Malus species

    Objective

    The proposed candidate gene underlying the Malus fusca fire blight resistance locus on chromosome 10 was previously predicted to possess...

    Ofere Francis Emeriewen, Henryk Flachowsky, Andreas Peil in BMC Research Notes
    Article Open access 27 July 2021
  2. A framework for the evaluation and reporting of incidental findings in clinical genomic testing

    Currently, there are no widely accepted recommendations in the genomics field guiding the return of incidental findings (IFs), defined here as...

    Carolyn M. Brown, Laura M. Amendola, ... Alison J. Coffey in European Journal of Human Genetics
    Article 02 April 2024
  3. Recombination drives the emergence of orf virus diversity: evidence from the first complete genome sequence of an Indian orf virus isolate and comparative genomic analysis

    Contagious pustular dermatitis is a disease that primarily infects small ruminants and possesses zoonotic potential. It is caused by orf virus...

    Basanta Pravas Sahu, Prativa Majee, ... Debasis Nayak in Archives of Virology
    Article 11 May 2022
  4. Preparation of NanoMEDIC Extracellular Vesicles to Deliver CRISPR-Cas9 Ribonucleoproteins for Genomic Exon Skip**

    The CRISPR-Cas9 system has quickly become the standard tool for genome editing. To deliver this system to target cells, adeno-associated virus (AAV)...
    Kei Watanabe, Peter Gee, Akitsu Hotta in Muscular Dystrophy Therapeutics
    Protocol 2023
  5. Whole genome sequence of Citrus yellow vein clearing virus CA1 isolate

    Objectives

    Citrus yellow vein clearing virus (CYVCV) is an emerging disease that poses a significant threat to the citrus industry in California. In...

    Yongduo Sun, Raymond Yokomi in BMC Research Notes
    Article Open access 10 August 2023
  6. Constant ratio between the genomic components of bipartite begomoviruses during infection and transmission

    The genomic components of multipartite viruses are encapsidated in separate virus particles, and the frequencies of genomic components represent one...

    Yu-**n **ao, Di Li, ... Li-Long Pan in Virology Journal
    Article Open access 21 August 2023
  7. Taxonomic Classification of Geminiviruses Based on Pairwise Sequence Comparisons

    Geminiviridae is the largest and one of the most diverse families of plant viruses, comprising 14 genera demarcated based on host range, type of...
    João Paulo Herrera da Silva, F. Murilo Zerbini in Plant-Virus Interactions
    Protocol 2024
  8. The hospital Israelita Albert Einstein standards for constitutional sequence variants classification: version 2023

    Background

    Next-generation sequencing has had a significant impact on genetic disease diagnosis, but the interpretation of the vast amount of genomic...

    Caio Robledo D’Angioli Costa Quaio, José Ricardo Magliocco Ceroni, ... Joao Bosco de Oliveira Filho in Human Genomics
    Article Open access 16 November 2023
  9. Urothelial Bladder Cancer: Genomic Alterations in Fibroblast Growth Factor Receptor

    Background and Objective

    Genomic alterations in fibroblast growth factor receptor ( FGFR) genes have been linked to a reduced response to immune...

    Maroun Bou Zerdan, Gennady Bratslavsky, ... Alina Basnet in Molecular Diagnosis & Therapy
    Article 17 May 2023
  10. Genomic instability evaluation in different cell line by random amplified polymorphic DNA-PCR analysis

    The cause of cancer is disorders and unstable genome. Some factors affect proper functioning of the DNA. These situations lead to cell death, cancer,...

    Article 04 March 2024
  11. Australian public perspectives on genomic data governance: responsibility, regulation, and logistical considerations

    Genomic sequencing generates huge volumes of data, which may be collected or donated to form large genomic databases. Such information can be stored...

    Fiona Lynch, Yan Meng, ... Danya F. Vears in European Journal of Human Genetics
    Article 10 May 2023
  12. Cytogenetics investigation in 151 Brazilian infertile male patients and genomic analysis in selected cases: experience of 14 years in a public genetic service

    Objectives

    Male infertility accounts for approximately 30% of cases of reproductive failure. The characterization of genetic variants using...

    Márcia Regina Gimenes Adriano, Adriana Bortolai, ... Alexandre Torchio Dias in BMC Research Notes
    Article Open access 05 March 2024
  13. DsRNA sequencing revealed a previously missed terminal sequence of a +ssRNA virus that infects dinoflagellate Heterocapsa circularisquama

    Heterocapsa circularisquama RNA virus (HcRNAV) is the only dinoflagellate-infecting RNA virus cultured. However, only two strains of HcRNAV have been...

    Michiko Takahashi, Yuichi Masuda, ... Keizo Nagasaki in Virus Genes
    Article 10 January 2024
  14. Genomic profiling of small bowel adenocarcinoma: a pooled analysis from 3 databases

    Background

    Small bowel adenocarcinoma is a rare disease. The genomic profiling tumours according to clinical characteristics and its impact on the...

    Thomas Aparicio, Julie Henriques, ... Pierre Laurent Puig in British Journal of Cancer
    Article 14 May 2024
  15. Genomic Microsatellite Mining and Characteristic Analysis of Gobiidae Fish

    Abstract

    Microsatellites or single sequence repeats (SSRs) are widespread in the genome of eukaryotes and prokaryotes, and are usually used for...

    S. Ma, N. Song in Russian Journal of Genetics
    Article 19 June 2024
  16. Otus scops adenovirus: the complete genome sequence of a novel aviadenovirus discovered in a wild owl

    We present the complete genome sequence of an aviadenovirus obtained by metagenomics from cloacal swabs taken from a free-living Eurasian scops owl ( O...

    Weibo Zheng, Tingshu Jiang, ... **ngxiao Zhang in Archives of Virology
    Article 19 January 2023
  17. Complete nucleotide sequence of hackberry virus A, a tentative member of the genus Waikavirus

    The complete genomic sequence of a waikavirus from Chinese hackberry in Zhejiang province, China, named “hackberry virus A” (HVA), was determined...

    Jiajia Weng, Mengting Wu, ... Fei Yan in Archives of Virology
    Article 12 April 2023
  18. Leveraging functional genomic annotations and genome coverage to improve polygenic prediction of complex traits within and between ancestries

    We develop a method, SBayesRC, that integrates genome-wide association study (GWAS) summary statistics with functional genomic annotations to improve...

    Zhili Zheng, Shouye Liu, ... Jian Zeng in Nature Genetics
    Article Open access 30 April 2024
  19. Genomic analysis reveals HDAC1 regulates clinically relevant transcriptional programs in Pancreatic cancer

    Novel strategies are needed to combat multidrug resistance in pancreatic ductal adenocarcinoma (PDAC). We applied genomic approaches to understand...

    Carter A. Wright, Emily R. Gordon, Sara J. Cooper in BMC Cancer
    Article Open access 23 November 2023
  20. DNA sequence and chromatin modifiers cooperate to confer epigenetic bistability at imprinting control regions

    Genomic imprinting is regulated by parental-specific DNA methylation of imprinting control regions (ICRs). Despite an identical DNA sequence, ICRs...

    Stefan Butz, Nina Schmolka, ... Tuncay Baubec in Nature Genetics
    Article Open access 04 November 2022
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