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Open AccessStructure and function of rice hybrid genomes reveal genetic basis and optimal performance of heterosis
Exploitation of crop heterosis is crucial for increasing global agriculture production. However, the quantitative genomic analysis of heterosis was lacking, and there is currently no effective prediction tool ...
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Publisher Correction: Pan-genome analysis highlights the extent of genomic variation in cultivated and wild rice
When published, this article did not initially appear open access. This error has been corrected, and the open access status of the paper is noted in all versions of the paper.
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Open AccessPan-genome analysis highlights the extent of genomic variation in cultivated and wild rice
The rich genetic diversity in Oryza sativa and Oryza rufipogon serves as the main sources in rice breeding. Large-scale resequencing has been undertaken to discover allelic variants in rice, but much of the infor...
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OsSPL13 controls grain size in cultivated rice
Bin Han and colleagues present a genome-wide association analysis of grain size and shape in cultivated rice and identify a major locus for grain size encoding the transcription factor OsSPL13. They find that ...
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Erratum: The draft genome of the grass carp (Ctenopharyngodon idellus) provides insights into its evolution and vegetarian adaptation
Nat. Genet. 47, 625–631 (2015); published online 4 May 2015; corrected after print 15 July 2015 In the version of this article initially published, the affiliation for Songhun Jang was incorrectly listed as Ki...
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Open AccessThe draft genome of the grass carp (Ctenopharyngodon idellus) provides insights into its evolution and vegetarian adaptation
Bin Han and colleagues report the draft genome sequence of the grass carp Ctenopharyngodon idellus, a major commercially farmed species of freshwater fish. Analyses of the grass carp genome identify lineage-speci...
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A haplotype map of genomic variations and genome-wide association studies of agronomic traits in foxtail millet (Setaria italica)
Bin Han and colleagues report de novo assembly of the genome of a wild progenitor (Setaria viridis) of foxtail millet and low-pass resequencing of 916 diverse foxtail millet varieties. They identify 0.8 million c...
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Open AccessThe draft genome of the fast-growing non-timber forest species moso bamboo (Phyllostachys heterocycla)
Bin Han and colleagues report the draft genome of moso bamboo, an important non-timber forest product. RNA sequencing analysis of bamboo flowering tissues suggests a connection between drought-responsive genes...
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Genome-wide association study of flowering time and grain yield traits in a worldwide collection of rice germplasm
Bin Han and colleagues report low-coverage sequencing for 950 diverse rice accessions. They develop a framework for haplotype-based de novo assembly, phenotyped the 950 lines for 11 agronomic traits and used this...
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Genome-wide association studies of 14 agronomic traits in rice landraces
Bin Han and colleagues performed low-coverage sequencing of 517 rice landraces and constructed a high-density haplotype map of the rice genome. They have used this resource to carry out genome-wide association...