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Diversity and ecology of oxalotrophic bacteria

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  1. Article

    Open Access

    Assessment of fungal spores and spore-like diversity in environmental samples by targeted lysis

    At particular stages during their life cycles, fungi use multiple strategies to form specialized structures to survive unfavorable environmental conditions. These strategies encompass sporulation, as well as c...

    Andrea Corona Ramirez, Danaé Bregnard, Thomas Junier in BMC Microbiology (2023)

  2. Article

    Open Access

    Widespread bacterial diversity within the bacteriome of fungi

    Knowledge of associations between fungal hosts and their bacterial associates has steadily grown in recent years as the number and diversity of examinations have increased, but current knowledge is predominant...

    Aaron J. Robinson, Geoffrey L. House, Demosthenes P. Morales in Communications Biology (2021)

  3. Article

    Open Access

    Phylogenetic and functional marker genes to study ammonia-oxidizing microorganisms (AOM) in the environment

    The oxidation of ammonia plays a significant role in the transformation of fixed nitrogen in the global nitrogen cycle. Autotrophic ammonia oxidation is known in three groups of microorganisms. Aerobic ammonia...

    Pilar Junier, Verónica Molina, Cristina Dorador in Applied Microbiology and Biotechnology (2010)

  4. Article

    Open Access

    Community analysis of betaproteobacterial ammonia-oxidizing bacteria using the amoCAB operon

    The genes and intergenic regions of the amoCAB operon were analyzed to establish their potential as molecular markers for analyzing ammonia-oxidizing betaproteobacterial (beta-AOB) communities. Initially, sequenc...

    Pilar Junier, Ok-Sun Kim, Thomas Junier in Applied Microbiology and Biotechnology (2009)

  5. Article

    Open Access

    Genome-wide search reveals a novel GacA-regulated small RNA in Pseudomonas species

    Small RNAs (sRNAs) are widespread among bacteria and have diverse regulatory roles. Most of these sRNAs have been discovered by a combination of computational and experimental methods. In Pseudomonas aeruginosa, ...

    Nicolas González, Stephan Heeb, Claudio Valverde, Elisabeth Kay in BMC Genomics (2008)

  6. Article

    Open Access

    New complete genome sequences of human rhinoviruses shed light on their phylogeny and genomic features

    Human rhinoviruses (HRV), the most frequent cause of respiratory infections, include 99 different serotypes segregating into two species, A and B. Rhinoviruses share extensive genomic sequence similarity with ...

    Caroline Tapparel, Thomas Junier, Daniel Gerlach, Samuel Cordey in BMC Genomics (2007)