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Partitioning of root respiration into growth, maintenance, and ion uptake components in a young larch-dominated forest

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  1. Article

    Open Access

    Large variation in carbon dioxide emissions from tropical peat swamp forests due to disturbances

    The huge carbon stock of tropical peat swamp forest (PSF) in Southeast Asia has been threatened by environmental disturbances due to quasi-periodic El Niño-Southern Oscillation (ENSO) droughts, biomass and pea...

    Takashi Hirano, Shinjiro Ohkubo, Masayuki Itoh in Communications Earth & Environment (2024)

  2. Article

    Open Access

    Carbon dioxide emissions through land use change, fire, and oxidative peat decomposition in Borneo

    Borneo has accumulated an abundance of woody carbon in its forests and peat. However, agricultural land conversion accompanied by plantation development, dead wood burning, and peat drying from drainage are ma...

    Tomohiro Shiraishi, Ryuichi Hirata, Masato Hayashi, Takashi Hirano in Scientific Reports (2023)

  3. Article

    Open Access

    Cationic-nanogel nasal vaccine containing the ectodomain of RSV-small hydrophobic protein induces protective immunity in rodents

    Respiratory syncytial virus (RSV) is a leading cause of upper and lower respiratory tract infection, especially in children and the elderly. Various vaccines containing the major transmembrane surface proteins...

    Shingo Umemoto, Rika Nakahashi-Ouchida, Yoshikazu Yuki, Shiho Kurokawa in npj Vaccines (2023)

  4. Article

    Open Access

    Net greenhouse gas balance of fibre wood plantation on peat in Indonesia

    Tropical peatlands cycle and store large amounts of carbon in their soil and biomass15. Climate and land-use change alters greenhouse gas (GHG) fluxes of tropical peatlands, but the magnitude of these changes re...

    Chandra S. Deshmukh, Ari P. Susanto, Nardi Nardi, Nurholis Nurholis in Nature (2023)

  5. Article

    Open Access

    Peatland groundwater level in the Indonesian maritime continent as an alert for El Niño and moderate positive Indian Ocean dipole events

    In general, it is known that extreme climatic conditions such as El Niño and positive Indian Ocean Dipole (IOD+) cause prolonged drought in Indonesia's tropical peatlands so that groundwater levels (GWL) drop ...

    Albertus Sulaiman, Mitsuru Osaki, Hidenori Takahashi in Scientific Reports (2023)

  6. Chapter

    Soft Crystal Chemiluminescence Systems Using Organic Peroxides

    Chemiluminescence (CL) is a phenomenon in which a chemical reaction produces an excited-state product that emits light. Taking advantage of this property, several analytical methods to study the CL reactions b...

    Takashi Hirano, Chihiro Matsuhashi in Soft Crystals (2023)

  7. Article

    Open Access

    Substantial hysteresis in emergent temperature sensitivity of global wetland CH4 emissions

    Wetland methane (CH4) emissions ( \({F}_{{{CH}}_{4}}\) F ...

    Kuang-Yu Chang, William J. Riley, Sara H. Knox, Robert B. Jackson in Nature Communications (2021)

  8. Article

    Open Access

    Color-tunable bioluminescence imaging portfolio for cell imaging

    The present study describes a color-tunable imaging portfolio together with twelve novel coelenterazine (CTZ) analogues. The three groups of CTZ analogues create diverse hues of bioluminescence (BL) ranging fr...

    Shota Tamaki, Nobuo Kitada, Masahiro Kiyama, Rika Fujii in Scientific Reports (2021)

  9. Article

    Open Access

    Complete genome sequence of a methicillin-resistant Staphylococcus lugdunensis strain and characteristics of its staphylococcal cassette chromosome mec

    Symptoms of Staphylococcus lugdunensis infection are often similar to those of Staphylococcus aureus infection, including skin and soft-tissue lesions, bacteremia and infective endocarditis. Despite the severity ...

    Rie Shibuya, Yuki Uehara, Tadashi Baba, Kuniko Teruya, Kazuhito Satou in Scientific Reports (2020)

  10. Article

    In Situ Observation of Bainite Transformation and Simultaneous Carbon Enrichment in Austenite in Low-Alloyed TRIP Steel Using Time-of-Flight Neutron Diffraction Techniques

    An in situ neutron diffraction experiment during austempering of low-alloyed transformation-induced plasticity steel, Fe-1.48Si-1.52Mn-0.15C, in wt pct was conducted. In this study, time-of-flight neutron diffrac...

    Yusuke Onuki, Takashi Hirano in Metallurgical and Materials Transactions A (2019)

  11. Article

    Open Access

    Genome-wide mutation analysis of Helicobacter pylori after inoculation to Mongolian gerbils

    Helicobacter pylori is a pathogenic bacterium that causes various gastrointestinal diseases in the human stomach. H. pylori is well adapted to the human stomach but does not easily infect other animals. As a mode...

    Rumiko Suzuki, Kazuhito Satou, Akino Shiroma, Makiko Shimoji in Gut Pathogens (2019)

  12. Article

    Open Access

    Investigation of serum cortisol concentration as a potential prognostic marker in hospitalized dogs: a prospective observational study in a primary care animal hospital

    Dogs with various medical diseases are usually treated at hospitals; however, the prognostic markers in dogs remain unknown. The aim of this study was to investigate the ability of serum cortisol concentration...

    Masashi Yuki, Reina Aoyama, Takashi Hirano, Reina Tawada in BMC Veterinary Research (2019)

  13. Article

    Open Access

    Global transcriptome analysis of pig induced pluripotent stem cells derived from six and four reprogramming factors

    Pigs are important, both for agriculture and as animal models for human diseases. However, due to the lack of embryonic stem cells, the possibility of genetic modification is quite limited. To overcome this li...

    Tomokazu Fukuda, Koji Doi, Kenichiro Donai, Kouhei Takahashi in Scientific Data (2019)

  14. Article

    Open Access

    Difference in transducin-like enhancer of split 1 protein expression between basal cell adenomas and basal cell adenocarcinomas - an immunohistochemical study

    Basal cell adenoma (BCA) and basal cell adenocarcinoma (BCAC) are benign and malignant, basaloid salivary gland neoplasms, respectively. These tumors show a dual-cell proliferation of inner luminal/ductal cell...

    Yuzo Oyama, Haruto Nishida, Takahiro Kusaba, Hiroko Kadowaki in Diagnostic Pathology (2018)

  15. Article

    Open Access

    Graphical classification of DNA sequences of HLA alleles by deep learning

    Alleles of human leukocyte antigen (HLA)-A DNAs are classified and expressed graphically by using artificial intelligence “Deep Learning (Stacked autoencoder)”. Nucleotide sequence data corresponding to the le...

    Jun Miyake, Yuhei Kaneshita, Satoshi Asatani, Seiichi Tagawa, Hirohiko Niioka in Human Cell (2018)

  16. Article

    Open Access

    Advantages of genome sequencing by long-read sequencer using SMRT technology in medical area

    PacBio RS II is the first commercialized third-generation DNA sequencer able to sequence a single molecule DNA in real-time without amplification. PacBio RS II’s sequencing technology is novel and unique, enab...

    Kazuma Nakano, Akino Shiroma, Makiko Shimoji, Hinako Tamotsu, Noriko Ashimine in Human Cell (2017)

  17. Article

    Open Access

    Effect of climate warming on the annual terrestrial net ecosystem CO2 exchange globally in the boreal and temperate regions

    The net ecosystem CO2 exchange is the result of the imbalance between the assimilation process (gross primary production, GPP) and ecosystem respiration (RE). The aim of this study was to investigate temperature ...

    Zhiyuan Zhang, Renduo Zhang, Alessandro Cescatti, Georg Wohlfahrt in Scientific Reports (2017)

  18. Article

    Open Access

    Isolation and genomic characterization of a Dehalococcoides strain suggests genomic rearrangement during culture

    We have developed and characterized a bacterial consortium that reductively dechlorinates trichloroethene to ethene. Quantitative PCR analysis for the 16S rRNA and reductive dehalogenase genes showed that the ...

    Masafumi Yohda, Kentaro Ikegami, Yuto Aita, Mizuki Kitajima in Scientific Reports (2017)

  19. Article

    Open Access

    The power of single molecule real-time sequencing technology in the de novo assembly of a eukaryotic genome

    Second-generation sequencers (SGS) have been game-changing, achieving cost-effective whole genome sequencing in many non-model organisms. However, a large portion of the genomes still remains unassembled. We r...

    Hiroaki Sakai, Ken Naito, Eri Ogiso-Tanaka, Yu Takahashi in Scientific Reports (2015)

  20. Article

    Lessons learned from CarboEastAsia: carbon and water cycles in East Asian terrestrial ecosystems

    Joon Kim, Takashi Hirano, Guirui Yu, Shenggong Li, Koji Tamai in Journal of Forest Research (2013)

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