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  1. No Access

    Article

    Crop Straws with Contrasting C/N Ratios Affect the Organic Carbon Turnover and Its Net Sequestration Efficiency When Solely or Jointly Incorporated to a Fertilized Soil

    The quality (carbon to nitrogen ratio; C/N ratio) of crop residue affects the decomposition of soil organic carbon (SOC) due to the nutrient stoichiometry, which requires well-exploration especially on the dyn...

    **ushuang Li, Jianglan Shi, Juan Chen in Journal of Soil Science and Plant Nutrition (2024)

  2. No Access

    Article

    Phosphorus deficiency regulates the growth and photophysiology responses of an economic macroalga Gracilariopsis lemaneiformis to ocean acidification and warming

    Ocean acidification and warming caused by elevated CO2 are urgent problems facing the marine ecological environment. With the strengthening of environmental governance in China, anthropogenic inputs of terrestria...

    Wei Zhou, Hui Wu, Mengqi Shi, Zeyu Chen, **guo Wang in Journal of Applied Phycology (2024)

  3. Article

    Open Access

    Genomic survey and expression analysis of LcARFs reveal multiple functions to somatic embryogenesis in Liriodendron

    Auxin response factors (ARFs) are critical transcription factors that mediate the auxin signaling pathway and are essential for regulating plant growth. However, there is a lack of understanding regarding the ARF

    Lin Xu, Ye Liu, Jiaji Zhang, Weihuang Wu, Zhaodong Hao, Shichan He in BMC Plant Biology (2024)

  4. No Access

    Article

    Effects of root rot on microbial communities associated with goji berry (Lycium barbarum) in the Qaidam Basin, China

    Goji berry (Lycium barbarum) is an important cash crop in China. However, in recent years its yield has been threatened by root rot caused by fungal pathogens. The infection significantly alters the structure and...

    Zhilin Feng, Yuancan **ao, Na Li, Qingbo Gao in European Journal of Plant Pathology (2023)

  5. Article

    Open Access

    Phytosulfokine contributes to suspension culture of Cunninghamia lanceolata through its impact on redox homeostasis

    Suspension culture is widely used in the establishment of efficient plant regeneration systems, as well as in the mass production of plant secondary metabolites. However, the establishment of a suspension cult...

    Zhaodong Hao, **yu Shi, Hua Wu, Yiqing Yan, Kaifei **ng, Renhua Zheng in BMC Plant Biology (2023)

  6. No Access

    Article

    Phenolic acid-induced phase separation and translation inhibition mediate plant interspecific competition

    Phenolic acids (PAs) secreted by donor plants suppress the growth of their susceptible plant neighbours. However, how structurally diverse ensembles of PAs are perceived by plants to mediate interspecific comp...

    Zhouli **e, Shuai Zhao, Ying Li, Yuhua Deng, Yabo Shi, **aoyuan Chen in Nature Plants (2023)

  7. No Access

    Article

    Root 1-aminocyclopropane-l-carboxylic acid (ACC) and rhizosphere ACC deaminase-producing bacteria affect apple root architecture under soil compaction stress

    Soil compaction inhibits root growth by limiting ethylene diffusion and often occurs in apple orchards. This study explored the mechanism of ethylene accumulation around apple roots in compacted soil from a mi...

    Jiaqi Li, Mi Xun, Junyuan Shi, Bing Chen, Yu** Cheng, Weiwei Zhang in Plant and Soil (2023)

  8. No Access

    Article

    Carbon and nutrient limitations of soil microbial metabolism in Quercus aquifolioides forest ecosystems along a precipitation gradient on the eastern Qinghai-Tibetan Plateau

    The response of soil microbial metabolic limitation in forest ecosystems to various factors remains poorly understood. The purpose of the study was to reveal the characteristics of microbial metabolic limitati...

    **angwen Cao, Zuomin Shi, Jian Chen, Shun Liu, Miaomiao Zhang, Miao Chen in Plant and Soil (2023)

  9. Article

    Open Access

    Correction: Uncovering the involvement of DoDELLA1-interacting proteins in development by characterizing the DoDELLA gene family in Dendrobium officinale

    Danqi Zeng, Can Si, Jaime A. Teixeira da Silva, Hongyu Shi, **g Chen in BMC Plant Biology (2023)

  10. No Access

    Article

    Development of SNP marker panels for genoty** by target sequencing (GBTS) and its application in soybean

    A high-throughput genoty** platform with customized flexibility, high genoty** accuracy, and low cost is critical for marker-assisted selection and genetic map** in soybean. Three assay panels were selec...

    Qing Yang, Jianan Zhang, **aolei Shi, Lei Chen, Jun Qin in Molecular Breeding (2023)

  11. Article

    Open Access

    Genome-wide identification of the TIFY family reveals JAZ subfamily function in response to hormone treatment in Betula platyphylla

    The TIFY family is a plant-specific gene family and plays an important role in plant growth and development. But few reports have been reported on the phylogenetic analysis and gene expression profiling of TIF...

    Guanbin Lv, Rui Han, **g**g Shi, Kun Chen, Guifeng Liu, Qibin Yu in BMC Plant Biology (2023)

  12. Article

    Open Access

    Uncovering the involvement of DoDELLA1-interacting proteins in development by characterizing the DoDELLA gene family in Dendrobium officinale

    Gibberellins (GAs) are widely involved in plant growth and development. DELLA proteins are key regulators of plant development and a negative regulatory factor of GA. Dendrobium officinale is a valuable tradition...

    Danqi Zeng, Can Si, Jaime A. Teixeira da Silva, Hongyu Shi, **g Chen in BMC Plant Biology (2023)

  13. No Access

    Article

    Extracellular enzyme characteristics and microbial metabolic limitation in soil of subalpine forest ecosystems on the eastern Qinghai-Tibetan Plateau

    Subalpine forest ecosystems are sensitive to climate change, and extracellular enzyme activities and microbial metabolic limitation in soils are influenced by multiple factors including climate. The study aims...

    **angwen Cao, Zuomin Shi, Jian Chen, Shun Liu, Miaomiao Zhang, Miao Chen in Plant and Soil (2022)

  14. Article

    Open Access

    Comparative transcriptional analysis and identification of hub genes associated with wing differentiation of male in Aphis gossypii

    Aphis gossypii Glover (Hemiptera: Aphididae), a worldwide polyphagous phloem-feeding agricultural pest, has three wing morphs (winged parthenogenetic female, gynopara, and male) in the life cycle. The exclusive m...

    Ningbo HUANGFU, Qingyu SHI, Lulu CHEN, **aoyan MA in Journal of Cotton Research (2022)

  15. Article

    Open Access

    An integrated isotopic labeling and freeze sampling apparatus (ILSA) to support sampling leaf metabolomics at a centi-second scale

    Photosynthesis close interacts with respiration and nitrogen assimilation, which determine the photosynthetic efficiency of a leaf. Accurately quantifying the metabolic fluxes in photosynthesis, respiration an...

    Qiming Tang, Qingfeng Song, **aoxiang Ni, Zai Shi, Genyun Chen in Plant Methods (2022)

  16. No Access

    Article

    AtMYB31 is a wax regulator associated with reproductive development in Arabidopsis

    AtMYB31, a R2R3MYB transcription factor that modulates wax biosynthesis in reproductive tissues, is involved in seed development in Arabidopsis.

    Lei Shi, Yuqin Chen, Jun Hong, Gaodian Shen, Lukas Schreiber, Hagai Cohen in Planta (2022)

  17. No Access

    Article

    Integrated small RNA profiling and degradome analysis of Anthurium andraeanum cultivars with different-colored spathes

    MicroRNAs (miRNAs) are known to play vital roles in coloration of leaves, flowers, and fruits in plants. However, their functions in spathe coloration are poorly known. Anthurium andraeanum is a popular ornamenta...

    Fazhuang Lin, Shi-Peng Chen, Kuan-Hung Lin, Changming Chen in Journal of Plant Research (2022)

  18. No Access

    Article

    Growth Promotion and Salt-Tolerance Improvement of Gerbera jamesonii by Root Colonization of Piriformospora indica

    Interaction of plants with beneficial microbes is one of the strategies for increasing growth and resistance under environmental stresses. In this study, the effects of a fungus, Piriformospora indica, on growth ...

    Weiting Chen, Fazhuang Lin, Kuan-Hung Lin in Journal of Plant Growth Regulation (2022)

  19. Article

    Open Access

    Genomes of leafy and leafless Platanthera orchids illuminate the evolution of mycoheterotrophy

    To improve our understanding of the origin and evolution of mycoheterotrophic plants, we here present the chromosome-scale genome assemblies of two sibling orchid species: partially mycoheterotrophic Platanthera ...

    Ming-He Li, Ke-Wei Liu, Zhen Li, Hsiang-Chia Lu, Qin-Liang Ye in Nature Plants (2022)

  20. No Access

    Article

    γ-Aminobutyric acid a novel candidate for rapid induction in somatic embryogenesis of Liriodendron hybrid

    The γ-aminobutyric acid is a non-protein amino acid with a so far unestablished role in Liriodendron hybrid somatic embryogenesis. In this study, we aimed to establish a rapid somatic embryo induction methodology...

    Tingting Chen, Dingjie Yang, Ruifang Fan, Renhua Zheng, Ye Lu in Plant Growth Regulation (2022)

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