Skip to main content

and
  1. Article

    Open Access

    EnClaSC: a novel ensemble approach for accurate and robust cell-type classification of single-cell transcriptomes

    In recent years, the rapid development of single-cell RNA-sequencing (scRNA-seq) techniques enables the quantitative characterization of cell types at a single-cell resolution. With the explosive growth of the...

    **aoyang Chen, Shengquan Chen, Rui Jiang in BMC Bioinformatics (2020)

  2. Article

    Open Access

    VPAC: Variational projection for accurate clustering of single-cell transcriptomic data

    Single-cell RNA-sequencing (scRNA-seq) technologies have advanced rapidly in recent years and enabled the quantitative characterization at a microscopic resolution. With the exponential growth of the number of...

    Shengquan Chen, Kui Hua, Hongfei Cui, Rui Jiang in BMC Bioinformatics (2019)

  3. Article

    Open Access

    Predicting enhancers with deep convolutional neural networks

    With the rapid development of deep sequencing techniques in the recent years, enhancers have been systematically identified in such projects as FANTOM and ENCODE, forming genome-wide landscapes in a series of ...

    Xu Min, Wanwen Zeng, Shengquan Chen, Ning Chen, Ting Chen, Rui Jiang in BMC Bioinformatics (2017)