Skip to main content

and
  1. Article

    Open Access

    Map** recurrent mosaic copy number variation in human neurons

    When somatic cells acquire complex karyotypes, they often are removed by the immune system. Mutant somatic cells that evade immune surveillance can lead to cancer. Neurons with complex karyotypes arise during ...

    Chen Sun, Kunal Kathuria, Sarah B. Emery, ByungJun Kim in Nature Communications (2024)

  2. Article

    Open Access

    Genomic data resources of the Brain Somatic Mosaicism Network for neuropsychiatric diseases

    Somatic mosaicism is defined as an occurrence of two or more populations of cells having genomic sequences differing at given loci in an individual who is derived from a single zygote. It is a characteristic o...

    McKinzie A. Garrison, Yeongjun Jang, Taejeong Bae, Adriana Cherskov in Scientific Data (2023)

  3. Article

    Open Access

    Cas9 targeted enrichment of mobile elements using nanopore sequencing

    Mobile element insertions (MEIs) are repetitive genomic sequences that contribute to genetic variation and can lead to genetic disorders. Targeted and whole-genome approaches using short-read sequencing have b...

    Torrin L. McDonald, Weichen Zhou, Christopher P. Castro in Nature Communications (2021)

  4. Article

    Open Access

    Multi-platform discovery of haplotype-resolved structural variation in human genomes

    The incomplete identification of structural variants (SVs) from whole-genome sequencing data limits studies of human genetic diversity and disease association. Here, we apply a suite of long-read, short-read, ...

    Mark J. P. Chaisson, Ashley D. Sanders, Xuefang Zhao in Nature Communications (2019)

  5. Article

    Open Access

    An integrated map of structural variation in 2,504 human genomes

    Structural variants are implicated in numerous diseases and make up the majority of varying nucleotides among human genomes. Here we describe an integrated set of eight structural variant classes comprising bo...

    Peter H. Sudmant, Tobias Rausch, Eugene J. Gardner, Robert E. Handsaker in Nature (2015)

  6. No Access

    Article

    Map** copy number variation by population-scale genome sequencing

    Genomic structural variants (SVs) are abundant in humans, differing from other forms of variation in extent, origin and functional impact. Despite progress in SV characterization, the nucleotide resolution arc...

    Ryan E. Mills, Klaudia Walter, Chip Stewart, Robert E. Handsaker, Ken Chen in Nature (2011)

  7. Article

    Open Access

    A highly annotated whole-genome sequence of a Korean individual

    The genome of an anonymous Korean male has been sequenced using a broad spread of genomic techniques. This combinatorial approach allows for detailed characterization of sequence and structural variation. The ...

    Jong-Il Kim, Young Seok Ju, Hansoo Park, Sheehyun Kim, Seonwook Lee, Jae-Hyuk Yi in Nature (2009)