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  1. No Access

    Article

    GWAS identifies candidate genes affecting water absorption in foxtail millet seeds

    Foxtail millet (Setaria italica) is a major cereal crop cultivated in the arid and semi-arid regions of northern China. However, achieving uniform emergence poses a significant challenge in foxtail millet cultiva...

    Xukai Li, Yajun Li, Ruyang **, Mengmeng Hu, Yuanhuai Han in Plant Growth Regulation (2024)

  2. No Access

    Article

    Trash to treasure: lactate and protein lactylation in maize root impacts response to drought

    Lactate, protein lactylation (Kla), and specifically histone lactylation have recently been shown to regulate antipathogenic immune responses in mammals. Herein, after we confirmed the presence and accumulatio...

    Zi Shi, Miaoyi Zhou, Wei Song, Ya Liu, Ronghuan Wang in Science China Life Sciences (2023)

  3. Article

    Open Access

    Comparative analysis of mitochondrial genomes of maize CMS-S subtypes provides new insights into male sterility stability

    Cytoplasmic male sterility (CMS) is a trait of economic importance in the production of hybrid seeds. In CMS-S maize, exerted anthers appear frequently in florets of field-grown female populations where only c...

    Senlin **ao, **gfeng **ng, Tiange Nie, Aiguo Su, Ruyang Zhang in BMC Plant Biology (2022)

  4. No Access

    Article

    Diversity of endophytic bacteria in hybrid maize seeds and Bacillus mojavensis J2416-7 may be capable of vertical transmission

    The diversity of endophytic bacteria in the progeny is related to the parental lines. In this study, the traditional separation method was used to study the dominant endophytic bacteria of the shared paternal ...

    **anyu Wu, Zhishan Wang, Ruyang Zhang, Tianjun Xu, Jiuran Zhao in Archives of Microbiology (2022)

  5. Article

    Open Access

    Target-oriented prioritization: targeted selection strategy by integrating organismal and molecular traits through predictive analytics in breeding

    Genomic prediction in crop breeding is hindered by modeling on limited phenotypic traits. We propose an integrative multi-trait breeding strategy via machine learning algorithm, target-oriented prioritization ...

    Wenyu Yang, Tingting Guo, **gyun Luo, Ruyang Zhang, Jiuran Zhao in Genome Biology (2022)

  6. Article

    Open Access

    A two-phase comprehensive NSCLC prognostic study identifies lncRNAs with significant main effect and interaction

    Long noncoding RNA (lncRNA) are involved in regulating physiological behaviors for various malignant tumors, including non-small-cell lung cancer (NSCLC). However, few studies comprehensively evaluated both ln...

    **g Zhu, **xing Guan, **nyu Ji, Yunjie Song in Molecular Genetics and Genomics (2022)

  7. Article

    Open Access

    The genetic mechanism of heterosis utilization in maize improvement

    In maize hybrid breeding, complementary pools of parental lines with reshuffled genetic variants are established for superior hybrid performance. To comprehensively decipher the genetics of heterosis, we prese...

    Yingjie **ao, Shuqin Jiang, Qian Cheng, **aqing Wang, Jun Yan in Genome Biology (2021)

  8. Article

    Open Access

    Stalk architecture, cell wall composition, and QTL underlying high stalk flexibility for improved lodging resistance in maize

    Stalk fracture caused by strong wind can severely reduce yields in maize. Stalks with higher stiffness and flexibility will exhibit stronger lodging resistance. However, stalk flexibility is rarely studied in ...

    **aqing Wang, Zi Shi, Ruyang Zhang, Xuan Sun, Jidong Wang, Shuai Wang in BMC Plant Biology (2020)

  9. Article

    Open Access

    CUBIC: an atlas of genetic architecture promises directed maize improvement

    Identifying genotype-phenotype links and causative genes from quantitative trait loci (QTL) is challenging for complex agronomically important traits. To accelerate maize gene discovery and breeding, we presen...

    Hai-Jun Liu, **aqing Wang, Yingjie **ao, **gyun Luo, Feng Qiao in Genome Biology (2020)

  10. Article

    Open Access

    shinyBN: an online application for interactive Bayesian network inference and visualization

    High-throughput technologies have brought tremendous changes to biological domains, and the resulting high-dimensional data has also posed enormous challenges to computational science. A Bayesian network is a ...

    Jia** Chen, Ruyang Zhang, Xuesi Dong, Lijuan Lin, Ying Zhu, Jieyu He in BMC Bioinformatics (2019)

  11. Article

    Open Access

    Map** of a major QTL for salt tolerance of mature field-grown maize plants based on SNP markers

    Salt stress significantly restricts plant growth and production. Maize is an important food and economic crop but is also a salt sensitive crop. Identification of the genetic architecture controlling salt tole...

    Meijie Luo, Yanxin Zhao, Ruyang Zhang, **feng **ng, Minxiao Duan in BMC Plant Biology (2017)

  12. No Access

    Article

    Molecular map** of quantitative trait loci for three kernel-related traits in maize using a double haploid population

    Kernel size and kernel weight are important factors possibly involved in the determination of grain yield in maize, so identifying the genetic basis of kernel-related traits provides insights into the breeding...

    Zi Shi, Wei Song, **feng **ng, Minxiao Duan, Fengge Wang in Molecular Breeding (2017)

  13. Article

    Open Access

    Stability SCAD: a powerful approach to detect interactions in large-scale genomic study

    Evidence suggests that common complex diseases may be partially due to SNP-SNP interactions, but such detection is yet to be fully established in a high-dimensional small-sample (small-n-large-p) study. A numb...

    Jianwei Gou, Yang Zhao, Yongyue Wei, Chen Wu, Ruyang Zhang in BMC Bioinformatics (2014)

  14. No Access

    Article

    PU-H71 effectively induces degradation of IκB kinase β in the presence of TNF-α

    This study is to determine if PU-H71, a heat shock protein inhibitor, induces killing of malignant breast cells together with treatment of tumor necrosis factor-α (TNF-α). The related molecular mechanisms were...

    Zhuling Qu, Shiduan Wang, Ruyang Teng, Xuanlong Yi in Molecular and Cellular Biochemistry (2014)