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Article
Open AccessA hybrid computational strategy to address WGS variant analysis in >5000 samples
The decreasing costs of sequencing are driving the need for cost effective and real time variant calling of whole genome sequencing data. The scale of these projects are far beyond the capacity of typical comp...
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Article
Open AccessAssessing structural variation in a personal genome—towards a human reference diploid genome
Characterizing large genomic variants is essential to expanding the research and clinical applications of genome sequencing. While multiple data types and methods are available to detect these structural varia...
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Article
Open AccessLaunching genomics into the cloud: deployment of Mercury, a next generation sequence analysis pipeline
Massively parallel DNA sequencing generates staggering amounts of data. Decreasing cost, increasing throughput, and improved annotation have expanded the diversity of genomics applications in research and clin...
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Article
FUSARIUM-ID v. 1.0: A DNA Sequence Database for Identifying Fusarium
One of the greatest impediments to the study of Fusarium has been the incorrect and confused application of species names to toxigenic and pathogenic isolates, owing in large part to intrinsic limitations of morp...
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Chapter
FUSARIUM-ID v. 1.0: A DNA sequence database for identifying Fusarium
One of the greatest impediments to the study of Fusarium has been the incorrect and confused application of species names to toxigenic and pathogenic isolates, owing in large part to intrinsic limitations of morp...