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  1. Article

    Open Access

    Telomere-to-telomere Citrullus super-pangenome provides direction for watermelon breeding

    To decipher the genetic diversity within the cucurbit genus Citrullus, we generated telomere-to-telomere (T2T) assemblies of 27 distinct genotypes, encompassing all seven Citrullus species. This T2T super-pangeno...

    Yilin Zhang, Mingxia Zhao, **gsheng Tan, Minghan Huang, **ao Chu in Nature Genetics (2024)

  2. Article

    Open Access

    Unsupervised representation learning on high-dimensional clinical data improves genomic discovery and prediction

    Although high-dimensional clinical data (HDCD) are increasingly available in biobank-scale datasets, their use for genetic discovery remains challenging. Here we introduce an unsupervised deep learning model, ...

    Taedong Yun, Justin Cosentino, Babak Behsaz, Zachary R. McCaw in Nature Genetics (2024)

  3. Article

    Open Access

    Positive feedback loop of c-myc/XTP6/NDH2/NF-κB to promote malignant progression in glioblastoma

    Recent studies have highlighted the significant role of the NF-κB signaling pathway in the initiation and progression of cancer. Furthermore, long noncoding RNAs (lncRNAs) have been identified as pivotal regul...

    Feng **ao, Hong Zhu, Yun Guo in Journal of Experimental & Clinical Cancer … (2024)

  4. No Access

    Article

    Antibody–drug conjugates in gastric cancer: from molecular landscape to clinical strategies

    Antibody–drug conjugates (ADCs) represent a crucial component of targeted therapies in gastric cancer, potentially altering traditional treatment paradigms. Many ADCs have entered rigorous clinical trials base...

    Jia-Lin Hao, **n-Yun Li, Yu-Tong Liu, Ji-Xuan Lang, Di-Jie Liu in Gastric Cancer (2024)

  5. Article

    Open Access

    3D airway geometry analysis of factors in airway navigation failure for lung nodules

    This study aimed to quantitatively reveal contributing factors to airway navigation failure during radial probe endobronchial ultrasound (R-EBUS) by using geometric analysis in a three-dimensional (3D) space a...

    Hwan-ho Cho, Junsu Choe, Jonghoon Kim, Yoo ** Oh, Hyun** Park in Cancer Imaging (2024)

  6. Article

    Open Access

    Identification and validation of tumor-specific T cell receptors from tumor infiltrating lymphocytes using tumor organoid co-cultures

    T cell receptor-engineered T cells (TCR-Ts) therapy is promising for cancer immunotherapy. Most studies have focused on identifying tumor-specific T cell receptors (TCRs) through predicted tumor neoantigens. H...

    Zhilang Li, Lisha Ma, Zhaoya Gao, **ya Wang, Xuan Che in Cancer Immunology, Immunotherapy (2024)

  7. No Access

    Article

    Adverse effects of tamoxifen treatment on bone mineral density in premenopausal patients with breast cancer: a systematic review and meta-analysis

    It is well known that adjuvant tamoxifen treatment for breast cancer in postmenopausal women decreased bone loss. However, the effects of adjuvant tamoxifen therapy on bone mineral density (BMD) in premenopaus...

    Soo ** Lee, Chihwan David Cha, Hanpyo Hong, Yun Young Choi in Breast Cancer (2024)

  8. No Access

    Article

    MicroRNA-146a Signature in Psoriasis: A Systematic Review and Meta-Analysis

    Psoriasis is a chronic, inflammatory, T-cell-mediated disease with a multifactorial pathogenesis. MicroRNA (miRNA) alteration in psoriasis has been identified within the last few years. In particular, miR-146a...

    Pei-Yun Ho, Yu-Chen Huang in Molecular Diagnosis & Therapy (2024)

  9. No Access

    Article

    HLA-A+ tertiary lymphoid structures with reactivated tumor infiltrating lymphocytes are associated with a positive immunotherapy response in esophageal squamous cell carcinoma

    Immune checkpoint blockade (ICB) therapy provides remarkable clinical benefits for multiple cancer types. However, the overall response rate to ICB therapy remains low in esophageal squamous cell carcinoma (ES...

    Dandan Zhang, Dongxian Jiang, Li** Jiang, Jiakang Ma in British Journal of Cancer (2024)

  10. Article

    Open Access

    CCL11/CCR3-dependent eosinophilia alleviates malignant pleural effusions and improves prognosis

    Malignant pleural effusion (MPE) is a common occurrence in advanced cancer and is often linked with a poor prognosis. Eosinophils were reported to involve in the development of MPE. However, the role of eosino...

    Min Zhang, Lixia **a, Wenbei Peng, Guogang **e, Fei Li in npj Precision Oncology (2024)

  11. Article

    Open Access

    The landscape of RNA-chromatin interaction reveals small non-coding RNAs as essential mediators of leukemia maintenance

    RNA constitutes a large fraction of chromatin. Spatial distribution and functional relevance of most of RNA-chromatin interactions remain unknown. We established a landscape analysis of RNA-chromatin interacti...

    Haiyang Yun, Julian Zoller, Fengbiao Zhou, Christian Rohde, Yi Liu in Leukemia (2024)

  12. No Access

    Article

    UBTF mediates activation of L3MBTL2 to suppress NISCH expression through histone H2AK119 monoubiquitination modification in breast cancer

    Lethal(3)malignant brain tumor-like protein 2 (L3MBTL2) has been related to transcriptional inhibition and chromatin compaction. Nevertheless, the biological functions and mechanisms of L3MBTL2 are undefined i...

    Kun Chen, Yun Dong, Gaojian He, Xuefeng He in Clinical & Experimental Metastasis (2024)

  13. Article

    Open Access

    WZ-3146 acts as a novel small molecule inhibitor of KIF4A to inhibit glioma progression by inducing apoptosis

    Glioma is considered the most common primary malignant tumor of the central nervous system. Although traditional treatments have not achieved satisfactory outcomes, recently, targeted therapies for glioma have...

    Tao Yan, Qing Jiang, Guangpu Ni, Haofeng Ma, Yun Meng in Cancer Cell International (2024)

  14. Article

    Open Access

    CSRP1 gene: a potential novel prognostic marker in acute myeloid leukemia with implications for immune response

    Acute myeloid leukemia, constituting a majority of leukemias, grapples with a 24% 5-year survival rate. Recent strides in research have unveiled fresh targets for drug therapies. LIM-only, a pivotal transcript...

    Chunxia Zhao, Yulu Wang, Huan Wang, Amit Sharma, Yun Wu in Discover Oncology (2024)

  15. Article

    Publisher Correction: Cell-intrinsic and microenvironmental determinants of metastatic colonization

    Arthur W. Lambert, Yun Zhang, Robert A. Weinberg in Nature Cell Biology (2024)

  16. Article

    Open Access

    Evaluating the immunologically “cold” tumor microenvironment after treatment with immune checkpoint inhibitors utilizing PET imaging of CD4 + and CD8 + T cells in breast cancer mouse models

    Immune-positron emission tomography (PET) imaging with tracers that target CD8 and granzyme B has shown promise in predicting the therapeutic response following immune checkpoint blockade (ICB) in immunologica...

    Yun Lu, Hailey A. Houson, Carlos A. Gallegos, Alessandro Mascioni in Breast Cancer Research (2024)

  17. Article

    Open Access

    A novel surgical scheme for hepatectomy in hepatocellular carcinoma patients with clinically significant portal hypertension

    Clinically significant portal hypertension (CSPH) seriously affects the feasibility and safety of surgical treatment for hepatocellular carcinoma (HCC) patients. The aim of this study was to establish a new su...

    Jia-zhou Ye, Hua-ze Lu, Can Zeng, Guo Lei, **ao-bo Wang, Jie Chen, Tao Bai in BMC Cancer (2024)

  18. Article

    Open Access

    Individualized dynamic frailty-tailored therapy (DynaFiT) in elderly patients with newly diagnosed multiple myeloma: a prospective study

    It remains a substantial challenge to balance treatment efficacy and toxicity in geriatric patients with multiple myeloma (MM), primarily due to the dynamic nature of frailty. Here, we conducted a prospective ...

    Yingjie Zhang, **nyue Liang, Weiling Xu, **ngcheng Yi in Journal of Hematology & Oncology (2024)

  19. Article

    Open Access

    Correction: Inhibition of MTA1 by ERα contributes to protection hepatocellular carcinoma from tumor proliferation and metastasis

    Lei Deng, Hui Yang, Junwei Tang, Zhe Lin in Journal of Experimental & Clinical Cancer … (2024)

  20. Article

    Open Access

    First-line hepatic arterial infusion chemotherapy plus lenvatinib and PD-(L)1 inhibitors versus systemic chemotherapy alone or with PD-(L)1 inhibitors in unresectable intrahepatic cholangiocarcinoma

    Limited treatment options exist for unresectable intrahepatic cholangiocarcinoma (ICC), with systemic chemotherapy (SC) serving as the primary approach. This study aimed to assess the effectiveness of first-li...

    Yan-Song Lin, Shuo Li, **a Yang in Journal of Cancer Research and Clinical On… (2024)

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