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  1. Article

    Open Access

    Protein function prediction through multi-view multi-label latent tensor reconstruction

    In last two decades, the use of high-throughput sequencing technologies has accelerated the pace of discovery of proteins. However, due to the time and resource limitations of rigorous experimental functional ...

    Robert Ebo Armah-Sekum, Sandor Szedmak, Juho Rousu in BMC Bioinformatics (2024)

  2. Article

    Open Access

    Selected proceedings of Machine Learning in Systems Biology: MLSB 2016

    Aalt D. J. van Dijk, Harri Lähdesmäki, Dick de Ridder, Juho Rousu in BMC Bioinformatics (2016)

  3. Article

    Open Access

    An analytic and systematic framework for estimating metabolic flux ratios from 13C tracer experiments

    Metabolic fluxes provide invaluable insight on the integrated response of a cell to environmental stimuli or genetic modifications. Current computational methods for estimating the metabolic fluxes from 13C isoto...

    Ari Rantanen, Juho Rousu, Paula Jouhten, Nicola Zamboni in BMC Bioinformatics (2008)

  4. Article

    Open Access

    Probabilistic modeling and machine learning in structural and systems biology

    This supplement contains extended versions of a selected subset of papers presented at the workshop PMSB 2007, Probabilistic Modeling and Machine Learning in Structural and Systems Biology, Tuusula, Finland, f...

    Samuel Kaski, Juho Rousu, Esko Ukkonen in BMC Bioinformatics (2007)