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  1. Article

    Open Access

    Drug perturbation gene set enrichment analysis (dpGSEA): a new transcriptomic drug screening approach

    In this study, we demonstrate that our modified Gene Set Enrichment Analysis (GSEA) method, drug perturbation GSEA (dpGSEA), can detect phenotypically relevant drug targets through a unique transcriptomic enri...

    Mike Fang, Brian Richardson, Cheryl M. Cameron, Jean-Eudes Dazard in BMC Bioinformatics (2021)

  2. Article

    Open Access

    ROCS: a Reproducibility Index and Confidence Score for Interaction Proteomics Studies

    Affinity-Purification Mass-Spectrometry (AP-MS) provides a powerful means of identifying protein complexes and interactions. Several important challenges exist in interpreting the results of AP-MS experiments....

    Jean-Eudes Dazard, Sudipto Saha, Rob M Ewing in BMC Bioinformatics (2012)