Skip to main content

and
  1. Article

    Open Access

    Characterization of an expanded set of assays for immunomodulatory proteins using targeted mass spectrometry

    Immunotherapies are revolutionizing cancer care, but many patients do not achieve durable responses and immune-related adverse events are difficult to predict. Quantifying the hundreds of proteins involved in ...

    Jeffrey R. Whiteaker, Lei Zhao, Regine M. Schoenherr, Dongqing Huang in Scientific Data (2024)

  2. Article

    Open Access

    RNA and phosphoprotein profiles of TP53- and PTEN-knockouts in MCF10A at baseline and responding to DNA damage

    A wealth of proteogenomic data has been generated using cancer samples to deepen our understanding of the mechanisms of cancer and how biological networks are altered in association with somatic mutation of tu...

    ChenWei Lin, Regine M. Schoenherr, Uliana J. Voytovich, Richard G. Ivey in Scientific Data (2024)

  3. Article

    Open Access

    A dataset describing a suite of novel antibody reagents for the RAS signaling network

    RAS genes are frequently mutated in cancer and have for decades eluded effective therapeutic attack. The National Cancer Institute’s RAS Initiative has a focus on understanding pathways and discovering therapies ...

    Regine M. Schoenherr, Dongqing Huang, Uliana J. Voytovich in Scientific Data (2019)

  4. No Access

    Protocol

    Peptide Immunoaffinity Enrichment with Targeted Mass Spectrometry: Application to Quantification of ATM Kinase Phospho-Signaling

    Peptide immunoaffinity enrichment coupled with targeted mass spectrometry is a quantitative approach for the robust and reproducible quantification of peptide analytes. The approach is capable of multiplexed q...

    Jeffrey R. Whiteaker, Lei Zhao, Regine M. Schoenherr, Jacob J. Kennedy in ATM Kinase (2017)

  5. No Access

    Article

    Assessment of a method to characterize antibody selectivity and specificity for use in immunoprecipitation

    A quantitative mass spectrometry–based standard operating procedure to classify antibody performance in immunoprecipitation is assessed in a multilaboratory study.

    Edyta Marcon, Harshika Jain, Anandi Bhattacharya, Hongbo Guo in Nature Methods (2015)

  6. No Access

    Article

    Demonstrating the feasibility of large-scale development of standardized assays to quantify human proteins

    This Analysis reports the development and assessment of 645 multiple reaction monitoring (MRM) mass spectrometry assays to quantify 319 targeted human breast cancer proteins. The results of this pilot project ...

    Jacob J Kennedy, Susan E Abbatiello, Kyunggon Kim, ** Yan in Nature Methods (2014)