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  1. No Access

    Article

    Ketogenic diet-induced bile acids protect against obesity through reduced calorie absorption

    The low-carbohydrate ketogenic diet (KD) has long been practiced for weight loss, but the underlying mechanisms remain elusive. Gut microbiota and metabolites have been suggested to mediate the metabolic chang...

    **ao Li, Jie Yang, **aofeng Zhou, Chen Dai, Mengmeng Kong, Linshan **e in Nature Metabolism (2024)

  2. No Access

    Article

    TBC1D1 is an energy-responsive polarization regulator of macrophages via governing ROS production in obesity

    Energy status is linked to the production of reactive oxygen species (ROS) in macrophages, which is elevated in obesity. However, it is unclear how ROS production is upregulated in macrophages in response to e...

    Qi Wang, ** Rong, Wen Zhang, **nyu Yang, Liang Chen in Science China Life Sciences (2024)

  3. No Access

    Article

    Trans-nuclease activity of Cas9 activated by DNA or RNA target binding

    Type V and type VI CRISPR–Cas systems have been shown to cleave nonspecific single-stranded DNA (ssDNA) or single-stranded RNA (ssRNA) in trans, but this has not been observed in type II CRISPR–Cas systems using ...

    Jiyun Chen, Ying Chen, Linglong Huang, **aofeng Lin, Hong Chen in Nature Biotechnology (2024)

  4. No Access

    Article

    Global convergence in terrestrial gross primary production response to atmospheric vapor pressure deficit

    Atmospheric vapor pressure deficit (VPD) increases with climate warming and may limit plant growth. However, gross primary production (GPP) responses to VPD remain a mystery, offering a significant source of u...

    Chao Huang, **gfeng Huang, **gfeng **ao, **ng Li in Science China Life Sciences (2024)

  5. No Access

    Article

    Metagenomic analysis of individual mosquito viromes reveals the geographical patterns and drivers of viral diversity

    Mosquito transmitted viruses are responsible for an increasing burden of human disease. Despite this, little is known about the diversity and ecology of viruses within individual mosquito hosts. Here, using a ...

    Yuan-Fei Pan, Hailong Zhao, Qin-Yu Gou, Pei-Bo Shi in Nature Ecology & Evolution (2024)

  6. Article

    Open Access

    Identification of membrane curvature sensing motifs essential for VPS37A phagophore recruitment and autophagosome closure

    VPS37A, an ESCRT-I complex component, is required for recruiting a subset of ESCRT proteins to the phagophore for autophagosome closure. However, the mechanism by which VPS37A is targeted to the phagophore rem...

    Yansheng Ye, **nwen Liang, Guifang Wang, Maria C. Bewley in Communications Biology (2024)

  7. Article

    Open Access

    Multi-modal molecular determinants of clinically relevant osteoporosis subtypes

    Due to a rapidly aging global population, osteoporosis and the associated risk of bone fractures have become a wide-spread public health problem. However, osteoporosis is very heterogeneous, and the existing s...

    Chunchun Yuan, **ang-Tian Yu, **g Wang, Bing Shu, **ao-Yun Wang in Cell Discovery (2024)

  8. Article

    Open Access

    Faecal hsa-miR-7704 inhibits the growth and adhesion of Bifidobacterium longum by suppressing ProB and aggravates hepatic encephalopathy

    Both gut microbiome and microRNAs (miRNAs) play a role in the development of hepatic encephalopathy (HE). However, the functional link between the microbiome and host-derived miRNAs in faeces remains poorly un...

    Yuchong Wang, Yuyu Li, Longxian Lv, Liying Zhu, Liang Hong in npj Biofilms and Microbiomes (2024)

  9. Article

    Open Access

    m6A-methylated KCTD21-AS1 regulates macrophage phagocytosis through CD47 and cell autophagy through TIPR

    Blocking immune checkpoint CD47/SIRPα is a useful strategy to engineer macrophages for cancer immunotherapy. However, the roles of CD47-related noncoding RNA in regulating macrophage phagocytosis for lung canc...

    Dong-Min Liang, You-Jie Li, Jia-**ang Zhang, Huan-Huan Shen in Communications Biology (2024)

  10. Article

    Open Access

    CIP2A induces PKM2 tetramer formation and oxidative phosphorylation in non-small cell lung cancer

    Tumor cells are usually considered defective in mitochondrial respiration, but human non-small cell lung cancer (NSCLC) tumor tissues are shown to have enhanced glucose oxidation relative to adjacent benign lu...

    Li-Jun Liang, Fu-Ying Yang, Di Wang, Yan-Fei Zhang, Hong Yu, Zheng Wang in Cell Discovery (2024)

  11. Article

    Open Access

    TNFα modulates PANX1 activation to promote ATP release and enhance P2RX7-mediated antitumor immune responses after chemotherapy in colorectal cancer

    ATP and its receptor P2RX7 exert a pivotal effect on antitumor immunity during chemotherapy-induced immunogenic cell death (ICD). Here, we demonstrated that TNFα-mediated PANX1 cleavage was essential for ATP r...

    Kevin Chih-Yang Huang, Shu-Fen Chiang, Pei-Chun Lin, Wei-Ze Hong in Cell Death & Disease (2024)

  12. Article

    Open Access

    Characterizing immune variation and diagnostic indicators of preeclampsia by single-cell RNA sequencing and machine learning

    Preeclampsia is a multifactorial and heterogeneous complication of pregnancy. Here, we utilize single-cell RNA sequencing to dissect the involvement of circulating immune cells in preeclampsia. Our findings re...

    Wenwen Zhou, Yixuan Chen, Yuhui Zheng, Yong Bai, Jianhua Yin in Communications Biology (2024)

  13. Article

    Open Access

    UBE2O reduces the effectiveness of interferon-α via degradation of IFIT3 in hepatocellular carcinoma

    Interferon (IFN) exerts its effects through interferon-stimulated genes (ISGs), but its efficacy is limited by interferon resistance, which can be caused by the ubiquitination of key proteins. UBE2O was initia...

    Heng Li, Yao Liu, Can Cheng, Yang Wu, Shu-Hang Liang, Liang Wu in Cell Death & Disease (2023)

  14. Article

    Open Access

    Comprehensive genomic profiling of breast cancers characterizes germline-somatic mutation interactions mediating therapeutic vulnerabilities

    Germline-somatic mutation interactions are universal and associated with tumorigenesis, but their role in breast cancer, especially in non-Caucasians, remains poorly characterized. We performed large-scale pro...

    Chao Chen, Cai-** Lin, Yu-Chen Pei, Ding Ma, Li Liao, Si-Yuan Li in Cell Discovery (2023)

  15. Article

    Open Access

    Spinal apolipoprotein E is involved in inflammatory pain via regulating lipid metabolism and glial activation in the spinal dorsal horn

    Inflammation and nerve injury promote astrocyte activation, which regulates the development and resolution of pain, in the spinal dorsal horn. APOE regulates lipid metabolism and is predominantly expressed in ...

    Siyi Liu, Shuting Yang, Xuan Zhu, **ang Li, ** Zhang, **aoqiong Zhou in Biology Direct (2023)

  16. No Access

    Article

    Tubular TMEM16A promotes tubulointerstitial fibrosis by suppressing PGC-1α-mediated mitochondrial homeostasis in diabetic kidney disease

    Tubulointerstitial fibrosis (TIF) plays a crucial role in the progression of diabetic kidney disease (DKD). However, the underlying molecular mechanisms remain obscure. The present study aimed to examine wheth...

    Jia-Ling Ji, Jun-Ying Li, Jian-**ang Liang in Cellular and Molecular Life Sciences (2023)

  17. Article

    Open Access

    Talaromyces marneffei suppresses macrophage inflammation by regulating host alternative splicing

    Talaromyces marneffei (T. marneffei) immune escape is essential in the pathogenesis of talaromycosis. It is currently known that T. marneffei achieves immune escape through various strategies. However, the role o...

    Wudi Wei, Gang Wang, Hong Zhang, **uli Bao, Sanqi An, Qiang Luo in Communications Biology (2023)

  18. Article

    Open Access

    Multi-omics data integration using ratio-based quantitative profiling with Quartet reference materials

    Characterization and integration of the genome, epigenome, transcriptome, proteome and metabolome of different datasets is difficult owing to a lack of ground truth. Here we develop and characterize suites of ...

    Yuanting Zheng, Yaqing Liu, **gcheng Yang, Lianhua Dong, Rui Zhang in Nature Biotechnology (2023)

  19. No Access

    Article

    Siglec-9 acts as an immune-checkpoint molecule on macrophages in glioblastoma, restricting T-cell priming and immunotherapy response

    Neoadjuvant immune-checkpoint blockade therapy only benefits a limited fraction of patients with glioblastoma multiforme (GBM). Thus, targeting other immunomodulators on myeloid cells is an attractive therapeu...

    Yan Mei, **umei Wang, Ji Zhang, Dan Liu, Junjie He, Chunliu Huang in Nature Cancer (2023)

  20. Article

    Specific pupylation as IDEntity reporter (SPIDER) for the identification of protein-biomolecule interactions

    Protein-biomolecule interactions play pivotal roles in almost all biological processes. For a biomolecule of interest, the identification of the interacting protein(s) is essential. For this need, although man...

    He-Wei Jiang, Hong Chen, Yun-**ao Zheng, Xue-Ning Wang in Science China Life Sciences (2023)

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