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  1. Article

    Open Access

    Analysis of the aging-related biomarker in a nonhuman primate model using multilayer omics

    Aging is a prominent risk factor for diverse diseases; therefore, an in-depth understanding of its physiological mechanisms is required. Nonhuman primates, which share the closest genetic relationship with hum...

    Yunpeng Liu, Shuaiyao Lu, **g Yang, Yun Yang, Li Jiao, **gwen Hu in BMC Genomics (2024)

  2. Article

    Open Access

    Effect of miR-149-5p on intramuscular fat deposition in pigs based on metabolomics and transcriptomics

    As one of the important traits in pig production, meat quality has important research significance and value. Intramuscular fat (IMF) content is one of the most important factors affecting pork quality. Many e...

    Yingke Liu, Yilin Wei, Yaqing Dou, Chenlei Li, Chenglei Song, Zhe Zhang in BMC Genomics (2023)

  3. Article

    Open Access

    Transcriptome-wide analysis of RNA m6A methylation regulation of muscle development in Queshan Black pigs

    N6-methyladenosine (m6A) refers to the methylation modification of N6 position of RNA adenine, a dynamic reversible RNA epigenetic modification that plays an important regulatory role in a variety of life process...

    Yaqing Dou, Yilin Wei, Zhe Zhang, Chenlei Li, Chenglei Song, Yingke Liu in BMC Genomics (2023)

  4. Article

    Open Access

    The genome of a vestimentiferan tubeworm (Ridgeia piscesae) provides insights into its adaptation to a deep-sea environment

    Vestimentifera (Polychaeta, Siboglinidae) is a taxon of deep-sea worm-like animals living in deep-sea hydrothermal vents, cold seeps, and organic falls. The morphology and lifespan of Ridgeia piscesae, which is t...

    Muhua Wang, Lingwei Ruan, Meng Liu, Zixuan Liu, Jian He, Long Zhang in BMC Genomics (2023)

  5. Article

    Open Access

    A comparative transcriptomic analysis reveals a coordinated mechanism activated in response to cold acclimation in common vetch (Vicia sativa L.)

    Due to its strong abiotic stress tolerance, common vetch is widely cultivated as a green manure and forage crop in grass and crop rotation systems. The comprehensive molecular mechanisms activated in common ve...

    Rui Dong, Ben Luo, Li Tang, Qiu-xia Wang, Zhong-Jie Lu, Chao Chen in BMC Genomics (2022)

  6. Article

    Open Access

    Structural variation of the malaria-associated human glycophorin A-B-E region

    Approximately 5% of the human genome shows common structural variation, which is enriched for genes involved in the immune response and cell-cell interactions. A well-established region of extensive structural...

    Sandra Louzada, Walid Algady, Eleanor Weyell, Luciana W. Zuccherato in BMC Genomics (2020)

  7. Article

    Open Access

    Skin transcriptome reveals the periodic changes in genes underlying cashmere (ground hair) follicle transition in cashmere goats

    Cashmere goats make an outstanding contribution to the livestock textile industry and their cashmere is famous for its slenderness and softness and has been extensively studied. However, there are few reports ...

    Feng Yang, Zhihong Liu, Meng Zhao, Qing Mu, Tianyu Che, Yuchun **e, Lina Ma in BMC Genomics (2020)

  8. No Access

    Article

    Genetic variation and population structure of different geographical populations of Meretrix petechialis based on mitochondrial gene COI

    The hard clam (Meretrix petechialis) is a commercially important shellfish in China. To provide valuable insights into management and conservation of M. petechialis, we investigated the genetic variation and popu...

    Jun-Hong Zheng, Hong-Tao Nie, Feng Yang, **-Wu Yan in Journal of Genetics (2019)

  9. Article

    Open Access

    Low-temperature-induced changes in the transcriptome reveal a major role of CgSVP genes in regulating flowering of Cymbidium goeringii

    Cymbidium goeringii is one of the most horticulturally important and popular ornamental plants in the orchid family (Orchidaceae). It blooms in winter during January–March and a period of low temperature is neces...

    Fengxi Yang, Genfa Zhu, Yonglu Wei, Jie Gao, Gang Liang, Lingyuan Peng in BMC Genomics (2019)

  10. No Access

    Article

    Characterization of a splice variant of soybean ERECTA devoid of an intracellular kinase domain in response to shade stress

    The receptor-like kinase ERECTA (ER) plays vital roles in plant adaptation under environmental stress including shade avoidance in Arabidopsis. In our previous study, we identified four ER paralogues in soybean (...

    Junbo Du, Yan Li, **n Sun, Liang Yu, Hengke Jiang, Qiulin Cao in Journal of Genetics (2018)

  11. No Access

    Article

    Expression analysis of argonaute, Dicer-like, and RNA-dependent RNA polymerase genes in cucumber (Cucumis sativus L.) in response to abiotic stress

    Posttranscriptional control of gene expression can be achieved through RNA interference when the activities of Dicer-like (DCL), argonaute (AGO) and RNA-dependent RNA polymerase (RDR) proteins are significant....

    DEFANG GAN, MENGDAN ZHAN, FENG YANG, QIQI ZHANG, KELING HU in Journal of Genetics (2017)

  12. Article

    Open Access

    Integrated mRNA and microRNA transcriptome variations in the multi-tepal mutant provide insights into the floral patterning of the orchid Cymbidium goeringii

    Cymbidium goeringii is a very famous traditional orchid plant in China, which is well known for its spectacular and diverse flower morphology. In particular, the multi-tepal mutants ha...

    Fengxi Yang, Genfa Zhu, Zhen Wang, Hailin Liu, Qingquan Xu, Dan huang in BMC Genomics (2017)

  13. Article

    Open Access

    Contrasting origin of B chromosomes in two cervids (Siberian roe deer and grey brocket deer) unravelled by chromosome-specific DNA sequencing

    B chromosomes are dispensable and variable karyotypic elements found in some species of animals, plants and fungi. They often originate from duplications and translocations of host genomic regions or result fr...

    Alexey I. Makunin, Ilya G. Kichigin, Denis M. Larkin in BMC Genomics (2016)

  14. No Access

    Article

    Novel NPHS1 gene mutations in a Chinese family with congenital nephrotic syndrome

    FENGJIE YANG, YAXIAN CHEN, YU ZHANG, LIRU QIU, YU CHEN, JIANHUA ZHOU in Journal of Genetics (2016)

  15. Article

    Open Access

    A dense SNP genetic map constructed using restriction site-associated DNA sequencing enables detection of QTLs controlling apple fruit quality

    Genetic map based quantitative trait locus (QTL) analysis is an important method for studying important horticultural traits in apple. To facilitate molecular breeding studies of fruit quality traits in apple,...

    Rui Sun, Yuansheng Chang, Fengqiu Yang, Yi Wang, Hui Li, Yongbo Zhao in BMC Genomics (2015)

  16. Article

    Open Access

    Expansion of the HSFY gene family in pig lineages

    Amplified gene families on sex chromosomes can harbour genes with important biological functions, especially relating to fertility. The Y-linked heat shock transcription factor (HSFY) family has become amplified ...

    Benjamin M Skinner, Kim Lachani, Carole A Sargent, Fengtang Yang in BMC Genomics (2015)

  17. Article

    Open Access

    Functional gene arrays-based analysis of fecal microbiomes in patients with liver cirrhosis

    Human gut microbiota plays an important role in the pathogenesis of cirrhosis complications. Although the phylogenetic diversity of intestinal microbiota in patients with liver cirrhosis has been examined in s...

    Yanfei Chen, Nan Qin, **g Guo, Guirong Qian, Daiqiong Fang, Ding Shi in BMC Genomics (2014)

  18. Article

    Open Access

    Two new cytotypes reinforce that Micronycteris hirsuta Peters, 1869 does not represent a monotypic taxon

    The genus Micronycteris is a diverse group of phyllostomid bats currently comprising 11 species, with diploid number (2n) ranging from 26 to 40 chromosomes. The karyotypic relationships within Micronycteris and b...

    Talita FA Ribas, Luis RR Rodrigues, Cleusa Y Nagamachi, Anderson JB Gomes in BMC Genetics (2013)

  19. Article

    Open Access

    Integrating cytogenetics and genomics in comparative evolutionary studies of cichlid fish

    The availability of a large number of recently sequenced vertebrate genomes opens new avenues to integrate cytogenetics and genomics in comparative and evolutionary studies. Cytogenetic map** can offer alter...

    Juliana Mazzuchelli, Thomas David Kocher, Fengtang Yang, Cesar Martins in BMC Genomics (2012)

  20. No Access

    Article

    The alimentary canal of Blomia tropicalis (Acari: Astigmata: Echymopodidae): the application of three-dimensional reconstruction technology

    The domestic mite species Blomia tropicalis is an important indoor allergen source related to asthma and other allergic diseases in tropical and subtropical regions. Here, we describe the alimentary canal of B. t...

    Jie Wu, Fengwei Yang, Zhigang Liu, Guihua Wu in Experimental and Applied Acarology (2009)

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