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  1. Article

    Open Access

    Improved genome recovery and integrated cell-size analyses of individual uncultured microbial cells and viral particles

    Microbial single-cell genomics can be used to provide insights into the metabolic potential, interactions, and evolution of uncultured microorganisms. Here we present WGA-X, a method based on multiple displace...

    Ramunas Stepanauskas, Elizabeth A. Fergusson, Joseph Brown in Nature Communications (2017)

  2. Article

    Open Access

    Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

    Standards for sequencing the microbial 'uncultivated majority', namely bacterial and archaeal single-cell genome sequences, and genome sequences from metagenomic datasets, are proposed.

    Robert M Bowers, Nikos C Kyrpides, Ramunas Stepanauskas in Nature Biotechnology (2017)

  3. Article

    Open Access

    Author Correction: Improved genome recovery and integrated cell-size analyses of individual uncultured microbial cells and viral particles

    The original version of this Article contained errors in the units of concentration of three reagents listed in the Methods. These errors have all been corrected in both the PDF and HTML versions of the Article.

    Ramunas Stepanauskas, Elizabeth A. Fergusson, Joseph Brown in Nature Communications (2017)

  4. Article

    Correction: Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

    Nat. Biotechnol. 35, 725–731 (2017); published online 8 August 2017; corrected after print 29 November 2017; corrected after print 7 December 2017 In the version of this article initially published, the follow...

    Robert M Bowers, Nikos C Kyrpides, Ramunas Stepanauskas in Nature Biotechnology (2018)

  5. Article

    Correction: Corrigendum: Minimum information about a single amplified genome (MISAG) and a metagenome-assembled genome (MIMAG) of bacteria and archaea

    Nat. Biotechnol. 35, 725–731 (2017); published online 8 August 2017; corrected after print 29 November 2017; corrected after print 7 December 2017 In the version of this article initially published, the author...

    Robert M Bowers, Nikos C Kyrpides, Ramunas Stepanauskas in Nature Biotechnology (2018)

  6. Article

    Open Access

    Hydrogen-based metabolism as an ancestral trait in lineages sibling to the Cyanobacteria

    The evolution of aerobic respiration was likely linked to the origins of oxygenic Cyanobacteria. Close phylogenetic neighbors to Cyanobacteria, such as Margulisbacteria (RBX-1 and ZB3), Saganbacteria (WOR-1), ...

    Paula B. Matheus Carnevali, Frederik Schulz, Cindy J. Castelle in Nature Communications (2019)

  7. Article

    Open Access

    Author Correction: Hydrogen-based metabolism as an ancestral trait in lineages sibling to the Cyanobacteria

    The original version of this Article contained errors in Fig. 4. In panel a, the labels ‘F420-reducing NiFe hydrogenase (group 3a)’ and ‘Group 2 NiFe hydrogenase’ were misplaced. These errors have been correct...

    Paula B. Matheus Carnevali, Frederik Schulz, Cindy J. Castelle in Nature Communications (2019)

  8. Article

    Open Access

    Hyperactive nanobacteria with host-dependent traits pervade Omnitrophota

    Candidate bacterial phylum Omnitrophota has not been isolated and is poorly understood. We analysed 72 newly sequenced and 349 existing Omnitrophota genomes representing 6 classes and 276 species, along with E...

    Cale O. Seymour, Marike Palmer, Eric D. Becraft in Nature Microbiology (2023)