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  1. Article

    Open Access

    Sequence determinants of human gene regulatory elements

    DNA can determine where and when genes are expressed, but the full set of sequence determinants that control gene expression is unknown. Here, we measured the transcriptional activity of DNA sequences that rep...

    Biswajyoti Sahu, Tuomo Hartonen, Päivi Pihlajamaa, Bei Wei, Kashyap Dave in Nature Genetics (2022)

  2. No Access

    Article

    Candidate susceptibility variants in angioimmunoblastic T-cell lymphoma

    Angioimmunoblastic T-cell lymphoma (AITL) is a subtype of peripheral T-cell lymphoma with a poor prognosis: the 5-year survival rate is approximately 30%. Somatic driver mutations have been found in TET2, IDH2, D...

    Iikki Donner, Riku Katainen, Eevi Kaasinen, Mervi Aavikko in Familial Cancer (2019)

  3. Article

    Open Access

    Global metabolomic profiling of uterine leiomyomas

    Uterine leiomyomas can be classified into molecularly distinct subtypes according to their genetic triggers: MED12 mutations, HMGA2 upregulation, or inactivation of FH. The aim of this study was to identify metab...

    Hanna-Riikka Heinonen, Miika Mehine, Netta Mäkinen in British Journal of Cancer (2017)

  4. Article

    Open Access

    Mendelian randomisation analysis strongly implicates adiposity with risk of develo** colorectal cancer

    Observational studies have associated adiposity with an increased risk of colorectal cancer (CRC). However, such studies do not establish a causal relationship. To minimise bias from confounding we performed a...

    David Jarvis, Jonathan S Mitchell, Philip J Law, Kimmo Palin in British Journal of Cancer (2016)

  5. No Access

    Article

    CTCF/cohesin-binding sites are frequently mutated in cancer

    Lauri Aaltonen, Jussi Taipale and colleagues report frequent mutation of CTCF- and cohesin-binding sites (CBSs) in multiple cancer types. They find that the frequency of CBS mutations in microsatellite-stable ...

    Riku Katainen, Kashyap Dave, Esa Pitkänen, Kimmo Palin, Teemu Kivioja in Nature Genetics (2015)