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    Article

    C11orf95RELA fusions drive oncogenic NF-κB signalling in ependymoma

    Members of the nuclear factor-κB (NF-κB) family of transcriptional regulators are central mediators of the cellular inflammatory response. Although constitutive NF-κB signalling is present in most human tumour...

    Matthew Parker, Kumarasamypet M. Mohankumar, Chandanamali Punchihewa in Nature (2014)

  2. Article

    Correction: Corrigendum: C11orf95–RELA fusions drive oncogenic NF-κB signalling in ependymoma

    Nature 506, 451–455 (2014); doi:10.1038/nature13109 In this Article, author Jared Becksfort’s surname was incorrectly spelled ‘Becksford’. Also, his affiliation should be the Department of Computational Biolog...

    Matthew Parker, Kumarasamypet M. Mohankumar, Chandanamali Punchihewa in Nature (2014)

  3. No Access

    Article

    The landscape of somatic mutations in epigenetic regulators across 1,000 paediatric cancer genomes

    Studies of paediatric cancers have shown a high frequency of mutation across epigenetic regulators. Here we sequence 633 genes, encoding the majority of known epigenetic regulatory proteins, in over 1,000 paed...

    Robert Huether, Li Dong, **ang Chen, Gang Wu, Matthew Parker in Nature Communications (2014)

  4. No Access

    Article

    Genomic landscape of paediatric adrenocortical tumours

    Paediatric adrenocortical carcinoma is a rare malignancy with poor prognosis. Here we analyse 37 adrenocortical tumours (ACTs) by whole-genome, whole-exome and/or transcriptome sequencing. Most cases (91%) sho...

    Emilia M. Pinto, **ang Chen, John Easton, David Finkelstein in Nature Communications (2015)

  5. Article

    Open Access

    Rise and fall of subclones from diagnosis to relapse in pediatric B-acute lymphoblastic leukaemia

    There is incomplete understanding of genetic heterogeneity and clonal evolution during cancer progression. Here we use deep whole-exome sequencing to describe the clonal architecture and evolution of 20 pediat...

    **aotu Ma, Michael Edmonson, Donald Yergeau, Donna M. Muzny in Nature Communications (2015)

  6. Article

    Open Access

    Clinical cancer genomic profiling by three-platform sequencing of whole genome, whole exome and transcriptome

    To evaluate the potential of an integrated clinical test to detect diverse classes of somatic and germline mutations relevant to pediatric oncology, we performed three-platform whole-genome (WGS), whole exome ...

    Michael Rusch, Joy Nakitandwe, Sheila Shurtleff, Scott Newman in Nature Communications (2018)

  7. Article

    Open Access

    Thermotolerance in the pathogen Cryptococcus neoformans is linked to antigen masking via mRNA decay-dependent reprogramming

    A common feature shared by systemic fungal pathogens of environmental origin, such as Cryptococcus neoformans, is their ability to adapt to mammalian core body temperature. In C. neoformans, this adaptation is ac...

    Amanda L. M. Bloom, Richard M. **, Jay Leipheimer in Nature Communications (2019)

  8. Article

    Open Access

    MYCN amplification and ATRX mutations are incompatible in neuroblastoma

    Aggressive cancers often have activating mutations in growth-controlling oncogenes and inactivating mutations in tumor-suppressor genes. In neuroblastoma, amplification of the MYCN oncogene and inactivation of th...

    Maged Zeineldin, Sara Federico, **ang Chen, Yi** Fan, Beisi Xu in Nature Communications (2020)

  9. Article

    Open Access

    Endothelialization of arterial vascular grafts by circulating monocytes

    Recently our group demonstrated that acellular tissue engineered vessels (A-TEVs) comprised of small intestinal submucosa (SIS) immobilized with heparin and vascular endothelial growth factor (VEGF) could be i...

    Randall J. Smith Jr., Bita Nasiri, Julien Kann, Donald Yergeau in Nature Communications (2020)

  10. Article

    Open Access

    Single cell transcriptomics reveals lineage trajectory of retinal ganglion cells in wild-type and Atoh7-null retinas

    Atoh7 has been believed to be essential for establishing the retinal ganglion cell (RGC) lineage, and Pou4f2 and Isl1 are known to regulate RGC specification and differentiation. Here we report our further stu...

    Fuguo Wu, Jonathan E. Bard, Julien Kann, Donald Yergeau in Nature Communications (2021)