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  1. Article

    Open Access

    Erratum to: Unraveling the clonal hierarchy of somatic genomic aberrations

    Davide Prandi, Sylvan C. Baca, Alessandro Romanel in Genome Biology (2017)

  2. No Access

    Article

    Clonal evolution of chemotherapy-resistant urothelial carcinoma

    Mark Rubin, Francesca Demichelis and colleagues study the evolution of urothelial carcinomas by performing whole-exome sequencing of tumors collected from patients before and after chemotherapy. They find mark...

    Bishoy M Faltas, Davide Prandi, Scott T Tagawa, Ana M Molina in Nature Genetics (2016)

  3. Article

    Open Access

    ASEQ: fast allele-specific studies from next-generation sequencing data

    Single base level information from next-generation sequencing (NGS) allows for the quantitative assessment of biological phenomena such as mosaicism or allele-specific features in healthy and diseased cells. S...

    Alessandro Romanel, Sara Lago, Davide Prandi, Andrea Sboner in BMC Medical Genomics (2015)

  4. Article

    Open Access

    Unraveling the clonal hierarchy of somatic genomic aberrations

    Defining the chronology of molecular alterations may identify milestones in carcinogenesis. To unravel the temporal evolution of aberrations from clinical tumors, we developed CLONET, which upon estimation of ...

    Davide Prandi, Sylvan C Baca, Alessandro Romanel, Christopher E Barbieri in Genome Biology (2014)