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Article
Open AccessAsmparts: assembly of biological model parts
We propose a new computational tool to produce models of biological systems by assembling models from biological parts. Our software not only takes advantage of modularity, but it also enforces standardisation...
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Article
Open AccessComputational design of digital and memory biological devices
The use of combinatorial optimization techniques with computational design allows the development of automated methods to design biological systems. Automatic design integrates design principles in an unsuperv...
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Article
Open AccessPROTDES: CHARMM toolbox for computational protein design
We present an open-source software able to automatically mutate any residue positions and find the best aminoacids in an arbitrary protein structure without requiring pairwise approximations. Our software, PRO...
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Article
Synthetic biology gains momentum in Europe