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Novel recycling strategy for distillers’ grains waste: prolonged biochar aging promotes cadmium immobilization and lettuce growth by regulating soil nutrient availability and bacterial composition

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  1. Article

    Open Access

    Systematic comparison of sequencing-based spatial transcriptomic methods

    Recent developments of sequencing-based spatial transcriptomics (sST) have catalyzed important advancements by facilitating transcriptome-scale spatial gene expression measurement. Despite this progress, effor...

    Yue You, Yuting Fu, Lanxiang Li, Zhongmin Zhang, Shikai Jia, Shihong Lu in Nature Methods (2024)

  2. Article

    Open Access

    Genetic Prediction of Osteoporosis by Anti-Müllerian Hormone Levels and Reproductive Factors in Women: A Mendelian Randomization Study

    Previous observational studies have suggested that anti-Müllerian hormone (AMH) and reproductive factors are linked to reduced bone mineral density (BMD) and an increased risk of osteoporosis (OP) in women. Ho...

    Yuan Li, **quan Lai, Wenbo Wu, Shuyi Ling, Yuqing Dai in Calcified Tissue International (2024)

  3. Article

    Open Access

    Virtual reality-empowered deep-learning analysis of brain cells

    Automated detection of specific cells in three-dimensional datasets such as whole-brain light-sheet image stacks is challenging. Here, we present DELiVR, a virtual reality-trained deep-learning pipeline for de...

    Doris Kaltenecker, Rami Al-Maskari, Moritz Negwer, Luciano Hoeher in Nature Methods (2024)

  4. Article

    Open Access

    Bacterial c-di-GMP triggers metamorphosis of mussel larvae through a STING receptor

    Bacteria induced metamorphosis observed in nearly all marine invertebrates. However, the mechanism of bacteria regulating the larvae-juvenile metamorphosis remains unknown. Here, we test the hypothesis that c-...

    **ao-Meng Hu, Lihua Peng, Yuyi Wang, Fan Ma, Yu Tao in npj Biofilms and Microbiomes (2024)

  5. Article

    Open Access

    The COP9 signalosome stabilized MALT1 promotes Non-Small Cell Lung Cancer progression through activation of NF-κB pathway

    MALT1 has been implicated as an upstream regulator of NF-κB signaling in immune cells and tumors. This study determined the regulatory mechanisms and biological functions of MALT1 in non-small cell lung cancer...

    Yinghui Wang, Xuyi Deng, **g **e, Tianhao Lu, Rui Qian in Cell Biology and Toxicology (2024)

  6. Article

    Open Access

    Genome-wide cross-disease analyses highlight causality and shared biological pathways of type 2 diabetes with gastrointestinal disorders

    Studies suggest links between diabetes and gastrointestinal (GI) traits; however, their underlying biological mechanisms remain unclear. Here, we comprehensively assess the genetic relationship between type 2 ...

    Emmanuel O. Adewuyi, Tenielle Porter, Eleanor K. O’Brien in Communications Biology (2024)

  7. Article

    Open Access

    Association between the atherogenic index of plasma and hearing loss based on a nationwide cross-sectional study

    Hearing loss (HL) is a worldwide public health issue for which the role of dyslipidemia has not been fully elucidated. This study aimed to use the atherogenic index of plasma (AIP), a well-established serum li...

    Zhiyuan Wu, Shu Wang, **aowu Huang, Mengyao **e, Zhi** Han in Lipids in Health and Disease (2024)

  8. Article

    Open Access

    Conserved DNA sequence analysis reveals the phylogeography and evolutionary events of Akebia trifoliata in the region across the eastern edge of the Tibetan Plateau and subtropical China

    The eastern edge of the Qinghai‒Tibet Plateau (QTP) and subtropical China have various regions where plant species originate and thrive, but these regions have been the focus of very few integrative studies. H...

    Qing Dong, Yongle Zhang, Shengfu Zhong, Qiuyi Zhang, Hao Yang in BMC Ecology and Evolution (2024)

  9. Article

    Open Access

    Hepatic Sirt6 activation abrogates acute liver failure

    Acute liver failure (ALF) is a deadly illness due to insufficient detoxification in liver induced by drugs, toxins, and other etiologies, and the effective treatment for ALF is very limited. Among the drug-ind...

    **que Luo, Huan Liu, Yanni Xu, Nanhui Yu, Rebbeca A. Steiner in Cell Death & Disease (2024)

  10. Article

    Open Access

    A high heterozygosity genome assembly of Aedes albopictus enables the discovery of the association of PGANT3 with blood-feeding behavior

    The Asian tiger mosquito, Aedes albopictus, is a global invasive species, notorious for its role in transmitting dangerous human arboviruses such as dengue and Chikungunya. Although hematophagous behavior is repu...

    Yuhua Deng, Shuyi Ren, Qiong Liu, Dan Zhou, Caimei Zhong, Yabin ** in BMC Genomics (2024)

  11. Article

    Open Access

    RBBP6 maintains glioblastoma stem cells through CPSF3-dependent alternative polyadenylation

    Glioblastoma is one of the most lethal malignant cancers, displaying striking intratumor heterogeneity, with glioblastoma stem cells (GSCs) contributing to tumorigenesis and therapeutic resistance. Pharmacolog...

    Peng Lin, Wenyan Chen, Zhilin Long, Jichuan Yu, Jiayao Yang, Zhen **a in Cell Discovery (2024)

  12. Article

    Open Access

    LINC00909 up-regulates pluripotency factors and promotes cancer stemness and metastasis in pancreatic ductal adenocarcinoma by targeting SMAD4

    Pancreatic cancer stem cells are crucial for tumorigenesis and cancer metastasis. Presently, long non-coding RNAs were found to be associated with Pancreatic Ductal Adenocarcinoma stemness characteristics but ...

    Zhenchong Li, Zuyi Ma, Shujie Wang, Qian Yan, Hongkai Zhuang, Zixuan Zhou in Biology Direct (2024)

  13. Article

    Open Access

    Molecular adaptations underlying high-frequency hearing in the brain of CF bats species

    The majority of bat species have developed remarkable echolocation ability, especially for the laryngeally echolocating bats along with high-frequency hearing. Adaptive evolution has been widely detected for t...

    **ntong Li, Hui Wang, Xue Wang, Mingyue Bao, Ruyi Sun, Wentao Dai in BMC Genomics (2024)

  14. Article

    Open Access

    Adaptive responses of erythritol-producing Yarrowia lipolytica to thermal stress after evolution

    Elucidation of the thermotolerance mechanism of erythritol-producing Yarrowia lipolytica is of great significance to breed robust industrial strains and reduce cost. This study aimed to breed thermotolerant Y. li...

    Kai **a, Yuqing Chen, Fangmei Liu, Xuequn Zhao in Applied Microbiology and Biotechnology (2024)

  15. Article

    Open Access

    The micro-743a-3p–GSTM1 pathway is an endogenous protective mechanism against alcohol-related liver disease in mice

    Epidemiological evidence suggests that the phenotype of glutathione S-transferase mu 1 (GSTM1), a hepatic high-expressed phase II detoxification enzyme, is closely associated with the incidence of alcohol-related...

    Tiantian Xu, Yan Pan, Qinchao Ding, Feiwei Cao in Cellular & Molecular Biology Letters (2024)

  16. Article

    Open Access

    Differentiated adaptative genetic architecture and language-related demographical history in South China inferred from 619 genomes from 56 populations

    The underrepresentation of human genomic resources from Southern Chinese populations limited their health equality in the precision medicine era and complete understanding of their genetic formation, admixture...

    Qiuxia Sun, Mengge Wang, Tao Lu, Shuhan Duan, Yan Liu, **g Chen in BMC Biology (2024)

  17. Article

    Open Access

    Targeted next-generation sequencing and long-read HiFi sequencing provide novel insights into clinically significant KLF1 variants

    Krüppel-like factor 1 (KLF1), a crucial erythroid transcription factor, plays a significant role in various erythroid changes and haemolytic diseases. The rare erythrocyte Lutheran inhibitor (In(Lu)) blood gro...

    Luyi Ye, Chen Wang, Ai**g Li, Minghao Li, Yan Pi, **gmin Yang, Ziyan Zhu in BMC Genomics (2024)

  18. Article

    Open Access

    Genome-wide identification of MAPK family in papaya (Carica papaya) and their involvement in fruit postharvest ripening

    Papaya (Carica papaya) is an economically important fruit cultivated in the tropical and subtropical regions of China. However, the rapid softening rate after postharvest leads to a short shelf-life and considera...

    Shengnan Zhu, Yuxing Mo, Yuyao Yang, Shiqi Liang, Shuqi **an in BMC Plant Biology (2024)

  19. Article

    Open Access

    Glucocorticoid activates STAT3 and NF-κB synergistically with inflammatory cytokines to enhance the anti-inflammatory factor TSG6 expression in mesenchymal stem/stromal cells

    Glucocorticoid (GC) is essential for maintaining immune homeostasis. While GC is known to regulate the expression of genes related to inflammation in immune cells, the effects of GC, especially in the presence...

    Peiqing Huang, Rongrong Sun, Chenchang Xu, Zixuan Jiang, Muqiu Zuo in Cell Death & Disease (2024)

  20. Article

    Open Access

    Network pharmacology to unveil the mechanism of suanzaoren decoction in the treatment of alzheimer’s with diabetes

    Suanzaoren Decoction (SZRD), a well-known formula from traditional Chinese medicine, has been shown to have reasonable cognitive effects while relaxing and alleviating insomnia. Several studies have demonstrat...

    Tao Chen, Yining Lei, Manqin Li, **nran Liu, Lu Zhang, Fei Cai, **aoming Gong in Hereditas (2024)

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