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  1. Article

    Open Access

    Systematic comparison of sequencing-based spatial transcriptomic methods

    Recent developments of sequencing-based spatial transcriptomics (sST) have catalyzed important advancements by facilitating transcriptome-scale spatial gene expression measurement. Despite this progress, effor...

    Yue You, Yuting Fu, Lanxiang Li, Zhongmin Zhang, Shikai Jia, Shihong Lu in Nature Methods (2024)

  2. Article

    Open Access

    Virtual reality-empowered deep-learning analysis of brain cells

    Automated detection of specific cells in three-dimensional datasets such as whole-brain light-sheet image stacks is challenging. Here, we present DELiVR, a virtual reality-trained deep-learning pipeline for de...

    Doris Kaltenecker, Rami Al-Maskari, Moritz Negwer, Luciano Hoeher in Nature Methods (2024)

  3. No Access

    Article

    Evaluating the effect of manual hoeing and chemical weed management practices on the productivity and profitability of dry bean (Phaseolus vulgaris L.) in the south-eastern zone of the DR Congo

    The proliferation of weeds in agricultural fields competes directly with crops for essential resources such as, leading to reduced crop yields and economic profitability. The objective of this study was to eva...

    Mick Assani Bin Lukangila, Bibich Kirika Ansey, David Bugeme Mugisho in Phytoparasitica (2024)

  4. Article

    Open Access

    Bacterial c-di-GMP triggers metamorphosis of mussel larvae through a STING receptor

    Bacteria induced metamorphosis observed in nearly all marine invertebrates. However, the mechanism of bacteria regulating the larvae-juvenile metamorphosis remains unknown. Here, we test the hypothesis that c-...

    **ao-Meng Hu, Lihua Peng, Yuyi Wang, Fan Ma, Yu Tao in npj Biofilms and Microbiomes (2024)

  5. No Access

    Article

    Comparative Bioactive Constituents, Radical Scavenging and Antidiabetic Properties of Fresh, Boiled and Air-Dried Momordica charantia Leaves

    Herbal processing methods are important scientific techniques through which purity, herbal quality and therapeutic properties, including enhancement of effectiveness or reduction of plant toxicity, are assured...

    Emmanuel Sina Akintimehin in Proceedings of the National Academy of Sci… (2024)

  6. No Access

    Article

    Evaluation of Anxiolytic Potential of Extract and Fractions of Vigna unguiculata spp dekindtiana in Mice

    Anxiety disorder is mental disease that is characterised by feeling of worry or fear that interferes with daily activity. The folkloric use of Vigna unguiculata spp dekindtiana has been reported in the management...

    Adekunle T. Adegbuyi, G. Olayiwola in Proceedings of the National Academy of Sci… (2024)

  7. No Access

    Article

    SUB1 promotes colorectal cancer metastasis by activating NF-κB signaling via UBR5-mediated ubiquitination of UBXN1

    Metastasis accounts for the major cause of colorectal cancer (CRC) related mortality due to the lack of effective treatments. In this study, we integrated the single-cell RNA-seq (scRNA-seq) and bulk RNA-seq d...

    Hao Wang, Wenwen Chen, Yanting Wang, Yuzhen Gao in Science China Life Sciences (2024)

  8. Article

    Open Access

    Genome-wide cross-disease analyses highlight causality and shared biological pathways of type 2 diabetes with gastrointestinal disorders

    Studies suggest links between diabetes and gastrointestinal (GI) traits; however, their underlying biological mechanisms remain unclear. Here, we comprehensively assess the genetic relationship between type 2 ...

    Emmanuel O. Adewuyi, Tenielle Porter, Eleanor K. O’Brien in Communications Biology (2024)

  9. Article

    Open Access

    Conserved DNA sequence analysis reveals the phylogeography and evolutionary events of Akebia trifoliata in the region across the eastern edge of the Tibetan Plateau and subtropical China

    The eastern edge of the Qinghai‒Tibet Plateau (QTP) and subtropical China have various regions where plant species originate and thrive, but these regions have been the focus of very few integrative studies. H...

    Qing Dong, Yongle Zhang, Shengfu Zhong, Qiuyi Zhang, Hao Yang in BMC Ecology and Evolution (2024)

  10. Article

    Open Access

    Hepatic Sirt6 activation abrogates acute liver failure

    Acute liver failure (ALF) is a deadly illness due to insufficient detoxification in liver induced by drugs, toxins, and other etiologies, and the effective treatment for ALF is very limited. Among the drug-ind...

    **que Luo, Huan Liu, Yanni Xu, Nanhui Yu, Rebbeca A. Steiner in Cell Death & Disease (2024)

  11. No Access

    Article

    CD146, a therapeutic target involved in cell plasticity

    Since its identification as a marker for advanced melanoma in the 1980s, CD146 has been found to have multiple functions in both physiological and pathological processes, including embryonic development, tissu...

    Zhenzhen Wu, Yuzhe Zang, Chuyi Li, Zhiheng He, **gyu Liu in Science China Life Sciences (2024)

  12. Article

    Open Access

    A high heterozygosity genome assembly of Aedes albopictus enables the discovery of the association of PGANT3 with blood-feeding behavior

    The Asian tiger mosquito, Aedes albopictus, is a global invasive species, notorious for its role in transmitting dangerous human arboviruses such as dengue and Chikungunya. Although hematophagous behavior is repu...

    Yuhua Deng, Shuyi Ren, Qiong Liu, Dan Zhou, Caimei Zhong, Yabin ** in BMC Genomics (2024)

  13. No Access

    Article

    Improved green and red GRAB sensors for monitoring dopaminergic activity in vivo

    Dopamine (DA) plays multiple roles in a wide range of physiological and pathological processes via a large network of dopaminergic projections. To dissect the spatiotemporal dynamics of DA release in both dens...

    Yizhou Zhuo, Bin Luo, **nyang Yi, Hui Dong, **aolei Miao, **xia Wan in Nature Methods (2024)

  14. No Access

    Article

    Biogeographic patterns and drivers of soil viromes

    Viruses are crucial in sha** soil microbial functions and ecosystems. However, studies on soil viromes have been limited in both spatial scale and biome coverage. Here we present a comprehensive synthesis of...

    Bin Ma, Yiling Wang, Kankan Zhao, Erinne Stirling, **aofei Lv in Nature Ecology & Evolution (2024)

  15. Article

    Open Access

    RBBP6 maintains glioblastoma stem cells through CPSF3-dependent alternative polyadenylation

    Glioblastoma is one of the most lethal malignant cancers, displaying striking intratumor heterogeneity, with glioblastoma stem cells (GSCs) contributing to tumorigenesis and therapeutic resistance. Pharmacolog...

    Peng Lin, Wenyan Chen, Zhilin Long, Jichuan Yu, Jiayao Yang, Zhen **a in Cell Discovery (2024)

  16. Article

    Open Access

    LINC00909 up-regulates pluripotency factors and promotes cancer stemness and metastasis in pancreatic ductal adenocarcinoma by targeting SMAD4

    Pancreatic cancer stem cells are crucial for tumorigenesis and cancer metastasis. Presently, long non-coding RNAs were found to be associated with Pancreatic Ductal Adenocarcinoma stemness characteristics but ...

    Zhenchong Li, Zuyi Ma, Shujie Wang, Qian Yan, Hongkai Zhuang, Zixuan Zhou in Biology Direct (2024)

  17. Article

    Open Access

    Molecular adaptations underlying high-frequency hearing in the brain of CF bats species

    The majority of bat species have developed remarkable echolocation ability, especially for the laryngeally echolocating bats along with high-frequency hearing. Adaptive evolution has been widely detected for t...

    **ntong Li, Hui Wang, Xue Wang, Mingyue Bao, Ruyi Sun, Wentao Dai in BMC Genomics (2024)

  18. Article

    Open Access

    Differentiated adaptative genetic architecture and language-related demographical history in South China inferred from 619 genomes from 56 populations

    The underrepresentation of human genomic resources from Southern Chinese populations limited their health equality in the precision medicine era and complete understanding of their genetic formation, admixture...

    Qiuxia Sun, Mengge Wang, Tao Lu, Shuhan Duan, Yan Liu, **g Chen in BMC Biology (2024)

  19. Article

    Open Access

    Targeted next-generation sequencing and long-read HiFi sequencing provide novel insights into clinically significant KLF1 variants

    Krüppel-like factor 1 (KLF1), a crucial erythroid transcription factor, plays a significant role in various erythroid changes and haemolytic diseases. The rare erythrocyte Lutheran inhibitor (In(Lu)) blood gro...

    Luyi Ye, Chen Wang, Ai**g Li, Minghao Li, Yan Pi, **gmin Yang, Ziyan Zhu in BMC Genomics (2024)

  20. Article

    Open Access

    Glucocorticoid activates STAT3 and NF-κB synergistically with inflammatory cytokines to enhance the anti-inflammatory factor TSG6 expression in mesenchymal stem/stromal cells

    Glucocorticoid (GC) is essential for maintaining immune homeostasis. While GC is known to regulate the expression of genes related to inflammation in immune cells, the effects of GC, especially in the presence...

    Peiqing Huang, Rongrong Sun, Chenchang Xu, Zixuan Jiang, Muqiu Zuo in Cell Death & Disease (2024)

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