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Metabolic engineering of Escherichia coli to efficiently produce 3-deacyl-2-acyloxyacyl-4′-monophosphoryl-lipid A

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  1. Article

    Open Access

    Porcine lung tissue slices: a culture model for PRCV infection and innate immune response investigations

    Respiratory coronaviruses (RCoVs) significantly threaten human health, necessitating the development of an ex vivo respiratory culture system for investigating RCoVs infection. Here, we successfully generated ...

    Shuxian Li, Yabin Lu, Shanshan Yang, Caiying Wang, **g Yang, **n Huang in AMB Express (2024)

  2. Article

    Correction: Metagenomic analysis of soil microbial communities associated with Poa alpigena Lindm in Haixin Mountain, Qinghai Lake

    Daoyuan Li, Hengsheng Wang, Naidong Chen in Brazilian Journal of Microbiology (2024)

  3. Article

    Open Access

    Recurrent neural network for predicting absence of heterozygosity from low pass WGS with ultra-low depth

    The absence of heterozygosity (AOH) is a kind of genomic change characterized by a long contiguous region of homozygous alleles in a chromosome, which may cause human genetic disorders. However, no method of l...

    Fei Tang, Zhonghua Wang, Yan Sun, Linlin Fan, Yun Yang, Xueqin Guo in BMC Genomics (2024)

  4. Article

    Open Access

    Comparative analysis of POD genes and their expression under multiple hormones in Pyrus bretschenedri

    Class III peroxidase (POD) enzymes play vital roles in plant development, hormone signaling, and stress responses. Despite extensive research on POD families in various plant species, the knowledge regarding t...

    Guohui Li, Muhammad Aamir Manzoor, Guoyu Wang, Shi** Huang in BMC Genomic Data (2024)

  5. Article

    Open Access

    Pangenome-Wide Association Study and Transcriptome Analysis Reveal a Novel QTL and Candidate Genes Controlling both Panicle and Leaf Blast Resistance in Rice

    Cultivating rice varieties with robust blast resistance is the most effective and economical way to manage the rice blast disease. However, rice blast disease comprises leaf and panicle blast, which are differ...

    Jian Wang, Haifei Hu, **anya Jiang, Shaohong Zhang, Wu Yang, **gfang Dong in Rice (2024)

  6. Article

    Open Access

    MFSynDCP: multi-source feature collaborative interactive learning for drug combination synergy prediction

    Drug combination therapy is generally more effective than monotherapy in the field of cancer treatment. However, screening for effective synergistic combinations from a wide range of drug combinations is parti...

    Yunyun Dong, Yunqing Chang, Yuxiang Wang, Qixuan Han, **aoyuan Wen in BMC Bioinformatics (2024)

  7. Article

    Open Access

    Influence of the Cellular Ultrastructure and Enzyme Activity of the Leaf Sheath on Spontaneous Defoliation in Sugarcane

    Spontaneous defoliation improves the harvesting efficiency and yield of sugarcane. Here, we investigated the ultrastructural changes and pectinase and cellulase activity in the third, fifth, and seventh leaf s...

    **n Hu, Tiantian Wang, Shaochun Liu, Jiawen Guo, **gmei Dao in Tropical Plant Biology (2024)

  8. Article

    Open Access

    Comparative analysis of the complete chloroplast genome sequences of four camellia species

    Researching the photosynthetic characteristics based on the whole chloroplast genome sequence of Camellia osmantha cv ‘yidan is important for improving production. We sequenced and analyzed the chloroplast (cp) ...

    Bingqing Hao, Yingying **a, Zhaoyuan Zhang, Dongxue Wang in Brazilian Journal of Botany (2024)

  9. Article

    Open Access

    Development of a CRISPR-Cas12a based assay for the detection of swine enteric coronaviruses in pig herds in China

    Porcine epidemic diarrhea virus (PEDV), Transmissible gastroenteritis virus (TGEV), Porcine deltacoronavirus (PDCoV) and Swine acute diarrhea syndrome coronavirus (SADS-CoV) rank among the most frequently enco...

    Yongbo **a, Yue Li, Yihong He, **aowei Wang, Wen**g Qiu in Advanced Biotechnology (2024)

  10. Article

    Open Access

    Gene flow and an anomaly zone complicate phylogenomic inference in a rapidly radiated avian family (Prunellidae)

    Resolving the phylogeny of rapidly radiating lineages presents a challenge when building the Tree of Life. An Old World avian family Prunellidae (Accentors) comprises twelve species that rapidly diversified at...

    Zhiyong Jiang, Wenqing Zang, Per G. P. Ericson, Gang Song, Shaoyuan Wu in BMC Biology (2024)

  11. Article

    Open Access

    Data notes on the proteomics of Dendrobium huoshanense under pb treatment

    Pb stress has a negative impact on plant growth by interfering with photosynthesis and releasing reactive oxygen species, causing major risks such as heavy metal ion accumulation in the soil matrix. A proteomi...

    Jun Dai, Yingyu Zhang, Yunpeng Zhang, Yan Wang, **aoyuan Ding in BMC Genomic Data (2024)

  12. Article

    Open Access

    Long-read sequencing reveals the structural complexity of genomic integration of HPV DNA in cervical cancer cell lines

    Cervical cancer (CC) causes more than 311,000 deaths annually worldwide. The integration of human papillomavirus (HPV) is a crucial genetic event that contributes to cervical carcinogenesis. Despite HPV DNA in...

    Zhijie Wang, Chen Liu, Wanxin Liu, **nyi Lv, Ting Hu, Fan Yang, Wenhui Yang in BMC Genomics (2024)

  13. Article

    Open Access

    Unraveling two decades of phyllosphere endophytes: tracing research trends and insights through visualized knowledge maps, with emphasis on microbial interactions as emerging frontiers

    Phyllosphere endophytes play a critical role in a myriad of biological functions, such as maintaining plant health and overall fitness. They play a determinative role in crop yield and quality by regulating vi...

    Muhammad Atif Muneer, **aohui Chen, Hexin Wang, Muhammad Zeeshan Munir in Stress Biology (2024)

  14. Article

    Open Access

    GOLGA7 is essential for NRAS trafficking from the Golgi to the plasma membrane but not for its palmitoylation

    NRAS mutations are most frequently observed in hematological malignancies and are also common in some solid tumors such as melanoma and colon cancer. Despite its pivotal role in oncogenesis, no effective therapie...

    Chenxuan Liu, Bo Jiao, Peihong Wang, Baoyuan Zhang in Cell Communication and Signaling (2024)

  15. Article

    Open Access

    Does arbuscular mycorrhizal fungi inoculation influence soil carbon sequestration?

    Whether arbuscular mycorrhizal fungi (AMF) inoculation promotes soil C sequestration is largely unknown. Here, meta-analysis and logistic regression were applied to study the ecological effects of AMF inoculat...

    Jianyu Tao, **aoyuan Liu in Biology and Fertility of Soils (2024)

  16. Article

    Open Access

    Genomic characterization of Listeria monocytogenes and Listeria innocua isolated from milk and dairy samples in Ethiopia

    Listeriosis caused by Listeria monocytogenes often poses a significant threat to vulnerable populations. Dairy products have been implicated in outbreaks of listeriosis worldwide. In Ethiopia, studies have identi...

    **aoyuan Wei, Anwar Hassen, Karen McWilliams, Karen Pietrzen in BMC Genomic Data (2024)

  17. Article

    Open Access

    A Mitochondrial Localized Chaperone Regulator OsBAG6 Functions in Saline-Alkaline Stress Tolerance in Rice

    B-cell lymphoma 2 (Bcl-2)-associated athanogene (BAG) family genes play prominent roles in regulating plant growth, development, and stress response. Although the molecular mechanism underlying BAG’s response ...

    Jie Wang, Min Ao, Ao Ma, **lei Yu, Peng Guo, Shuangzhan Huang, **aoyuan Peng in Rice (2024)

  18. Article

    Open Access

    A robust CRISPR interference gene repression system in Vibrio parahaemolyticus

    Vibrio parahaemolyticus is a significant cause of seafood-associated gastroenteritis and pestilence in aquaculture worldwide. Despite extensive research, strategies for protein depletion in this pathogen remain l...

    Taoyuan Jiang, Yuhuan Li, Wencong Hong, Mingyu Lin in Archives of Microbiology (2023)

  19. Article

    Open Access

    The involvement of E3 ubiquitin ligases in the development and progression of colorectal cancer

    To date, colorectal cancer (CRC) still has limited therapeutic efficacy and poor prognosis and there is an urgent need for novel targets to improve the outcome of CRC patients. The highly conserved ubiquitinat...

    Jie Chen, Haimei Feng, Yiting Wang, **aoming Bai, Siqi Sheng in Cell Death Discovery (2023)

  20. Article

    Open Access

    Functional and kinetics of two efficient phenylalanine ammonia lyase from Pyrus bretschneideri

    The enzyme phenylalanine ammonia lyase (PAL) controls the transition from primary to secondary metabolism by converting L-phenylalanine (L-Phe) to cinnamic acid. However, the function of PAL in pear plants (Pyrus...

    Guohui Li, Cheng Song, Muhammad Aamir Manzoor, Daoyuan Li, Yunpeng Cao in BMC Plant Biology (2023)

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