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  1. Article

    Open Access

    Biocaiv: an integrative webserver for motif-based clustering analysis and interactive visualization of biological networks

    As an important task in bioinformatics, clustering analysis plays a critical role in understanding the functional mechanisms of many complex biological systems, which can be modeled as biological networks. The...

    Dong-Xu Li, Peng Zhou, Bo-Wei Zhao, **ao-Rui Su, Guo-Dong Li in BMC Bioinformatics (2023)

  2. Article

    Open Access

    RLFDDA: a meta-path based graph representation learning model for drug–disease association prediction

    Drug repositioning is a very important task that provides critical information for exploring the potential efficacy of drugs. Yet develo** computational models that can effectively predict drug–disease assoc...

    Meng-Long Zhang, Bo-Wei Zhao, **ao-Rui Su, Yi-Zhou He, Yue Yang in BMC Bioinformatics (2022)

  3. Article

    Open Access

    Multi-view heterogeneous molecular network representation learning for protein–protein interaction prediction

    Protein–protein interaction (PPI) plays an important role in regulating cells and signals. Despite the ongoing efforts of the bioassay group, continued incomplete data limits our ability to understand the mole...

    **ao-Rui Su, Lun Hu, Zhu-Hong You, Peng-Wei Hu, Bo-Wei Zhao in BMC Bioinformatics (2022)

  4. Article

    Open Access

    In silico drug repositioning using deep learning and comprehensive similarity measures

    Drug repositioning, meanings finding new uses for existing drugs, which can accelerate the processing of new drugs research and development. Various computational methods have been presented to predict novel d...

    Hai-Cheng Yi, Zhu-Hong You, Lei Wang, **ao-Rui Su, ** Zhou in BMC Bioinformatics (2021)