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  1. Article

    Open Access

    The influence of sex-specific factors on biological transformations and health outcomes in aging processes

    The aging process demonstrates notable differences between males and females, which are key factors in disease susceptibility and lifespan. The differences in sex chromosomes are fundamental to the presence of...

    Yongyin Huang, Hongyu Li, Runyu Liang, Jia Chen, Qiang Tang in Biogerontology (2024)

  2. No Access

    Article

    CRISPR-array-mediated imaging of non-repetitive and multiplex genomic loci in living cells

    Dynamic imaging of genomic loci is key for understanding gene regulation, but methods for imaging genomes, in particular non-repetitive DNAs, are limited. We developed CRISPRdelight, a DNA-labeling system base...

    Liang-Zhong Yang, Yi-Hui Min, Yu-**n Liu, Bao-Qing Gao, **ao-Qi Liu in Nature Methods (2024)

  3. No Access

    Article

    Disrupting CCDC137-mediated LZTS2 and β-TrCP interaction in the nucleus inhibits hepatocellular carcinoma development via β-catenin and AKT

    Hepatocellular carcinoma (HCC) is a highly heterogeneous solid tumor, with its biological characteristics intricately linked to the activation of oncogenes. This research specifically explored CCDC137, a molec...

    Lei Xu, Qiumeng Liu, Hailing Liu, Feimu Fan, Pengcheng Li in Cell Death & Differentiation (2024)

  4. No Access

    Article

    Identifying modifiable factors and their joint effect on brain health: an exposome-wide association study

    Considerable uncertainty remains regarding the associations of multiple factors with brain health. We aimed to conduct an exposome-wide association study on neurodegenerative disease and neuropsychiatry disord...

    Liang-Yu Huang, Yi-Jun Ge, Yan Fu, Yong-Li Zhao, Ya-Nan Ou, Yi Zhang in GeroScience (2024)

  5. No Access

    Article

    Differentiation of bone marrow mesenchymal stem cells into Leydig-like cells with testicular extract liquid in vitro

    Differentiation of Leydig cells plays a key role in male reproductive function. Bone marrow mesenchymal stem cells (BMSCs) have emerged as a potential cell source for generating Leydig-like cells due to their ...

    Rong Hua, Fang-Fang Liang, Fang-Qiang Gong in In Vitro Cellular & Developmental Biology … (2024)

  6. Article

    Open Access

    Med1 inhibits ferroptosis and alleviates liver injury in acute liver failure via Nrf2 activation

    Extensive hepatocyte mortality and the absence of specific medical therapy significantly contribute to the unfavorable prognosis of acute liver failure (ALF). Ferroptosis is a crucial form of cell death involv...

    Zi-Ying Lei, Zhi-Hui Li, Deng-Na Lin, **g Cao, Jun-Feng Chen in Cell & Bioscience (2024)

  7. No Access

    Article

    Molecular basis for Gβγ-mediated activation of phosphoinositide 3-kinase γ

    The conversion of phosphatidylinositol 4,5-bisphosphate to phosphatidylinositol 3,4,5-triphosphate by phosphoinositide 3-kinase γ (PI3Kγ) is critical for neutrophil chemotaxis and cancer metastasis. PI3Kγ is a...

    Chun-Liang Chen, Ramizah Syahirah in Nature Structural & Molecular Biology (2024)

  8. No Access

    Article

    Structure and assembly of the α-carboxysome in the marine cyanobacterium Prochlorococcus

    Carboxysomes are bacterial microcompartments that encapsulate the enzymes RuBisCO and carbonic anhydrase in a proteinaceous shell to enhance the efficiency of photosynthetic carbon fixation. The self-assembly ...

    Rui-Qian Zhou, Yong-Liang Jiang, Haofu Li, Pu Hou, Wen-Wen Kong in Nature Plants (2024)

  9. Article

    Open Access

    Sugarcane borers: species, distribution, damage and management options

    Lepidopteran borers stand out as the most destructive pests in sugarcane, leading to reductions in stalk weight, juice quality and sugar recovery. Presently, integrated pest management (IPM) systems are utiliz...

    Ao-Mei Li, Zhong-Liang Chen, Fen Liao, Yong Zhao, Cui-**an Qin in Journal of Pest Science (2024)

  10. Article

    Open Access

    A small-molecule TNIK inhibitor targets fibrosis in preclinical and clinical models

    Idiopathic pulmonary fibrosis (IPF) is an aggressive interstitial lung disease with a high mortality rate. Putative drug targets in IPF have failed to translate into effective therapies at the clinical level. ...

    Feng Ren, Alex Aliper, Jian Chen, Heng Zhao, Sujata Rao in Nature Biotechnology (2024)

  11. No Access

    Article

    Improving growth, omega-3 contents, and disease resistance of Asian seabass: status of a 20-year family-based breeding program

    Aquaculture has been one of the fastest-growing sectors in agriculture and plays an important role in supplying high quality proteins for humans. Genetic improvement for important traits is essential for incre...

    G. H. Yue, L. Wang, F. Sun, Z. T. Yang, J. Wong in Reviews in Fish Biology and Fisheries (2024)

  12. Article

    Open Access

    Lessons learned: establishing a CLIA-equivalent laboratory for targeted mass spectrometry assays – navigating the transition from research to clinical practice

    Mass spectrometry (MS) assays offer exceptional capabilities in high multiplexity, specificity, and throughput. As proteomics technologies continue advancements to identify new disease biomarkers, transition o...

    Chia-Li Han, Chi-Ting Lai, Aaron James Reyes, Hao-Chin Yang in Clinical Proteomics (2024)

  13. No Access

    Article

    DNA loo** mediates cooperative transcription activation

    Transcription factors respond to multilevel stimuli and co-occupy promoter regions of target genes to activate RNA polymerase (RNAP) in a cooperative manner. To decipher the molecular mechanism, here we report...

    Shu-**g Han, Yong-Liang Jiang, Lin-Lin You in Nature Structural & Molecular Biology (2024)

  14. No Access

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  15. Article

    Open Access

    Sequencing by avidity enables high accuracy with low reagent consumption

    We present avidity sequencing, a sequencing chemistry that separately optimizes the processes of step** along a DNA template and that of identifying each nucleotide within the template. Nucleotide identifica...

    Sinan Arslan, Francisco J. Garcia, Minghao Guo in Nature Biotechnology (2024)

  16. Article

    Open Access

    Twnbiome: a public database of the healthy Taiwanese gut microbiome

    With new advances in next generation sequencing (NGS) technology at reduced costs, research on bacterial genomes in the environment has become affordable. Compared to traditional methods, NGS provides high-thr...

    Amrita Chattopadhyay, Chien-Yueh Lee, Ya-Chin Lee, Chiang-Lin Liu in BMC Bioinformatics (2023)

  17. No Access

    Article

    Dietary supplementation of pyridoxine can enhance the growth performance and improve the protein, lipid utilization efficiency of mandarin fish (Siniperca chuatsi)

    This study aimed to assess the effect of pyridoxine supplementation in the mandarin fish diet on growth performance, protein and lipid metabolism, and liver and intestinal histology. Mandarin fish were fed six...

    Rui-Peng **e, Xu-Fang Liang, Di Peng, Qi-Wei Zhang in Fish Physiology and Biochemistry (2023)

  18. No Access

    Article

    Tree species mixture effect on extracellular enzyme kinetics varies with enzyme type and soil depth in subtropical plantations

    Tree species mixing is an essential measure used to increase soil carbon (C) sinks and enhance nutrient cycling, while enzyme catalysis is the rate-limiting step of soil C mineralization and nutrient release. ...

    Xue-Li Jiang, Rong Mao, Zhong-Liang Li, Fu-Sheng Chen, Bin Xu, ** He in Plant and Soil (2023)

  19. Article

    Open Access

    CREaTor: zero-shot cis-regulatory pattern modeling with attention mechanisms

    Linking cis-regulatory sequences to target genes has been a long-standing challenge. In this study, we introduce CREaTor, an attention-based deep neural network designed to model cis-regulatory patterns for genom...

    Yongge Li, Fusong Ju, Zhiyuan Chen, Yiming Qu, Huanhuan **a, Liang He in Genome Biology (2023)

  20. Article

    Open Access

    Studying plant autophagy: challenges and recommended methodologies

    In plants, autophagy is a conserved process by which intracellular materials, including damaged proteins, aggregates, and entire organelles, are trafficked to the vacuole for degradation, thus maintaining cell...

    Hua Qi, Yao Wang, Yan Bao, Diane C. Bassham, Liang Chen in Advanced Biotechnology (2023)

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