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  1. No Access

    Article

    A spatiotemporal atlas of mouse liver homeostasis and regeneration

    The mechanism by which mammalian liver cell responses are coordinated during tissue homeostasis and perturbation is poorly understood, representing a major obstacle in our understanding of many diseases. This ...

    Jiangshan Xu, Pengcheng Guo, Shijie Hao, Shuncheng Shangguan, Quan Shi in Nature Genetics (2024)

  2. Article

    Open Access

    Single-cell transcriptomics reveal distinct immune-infiltrating phenotypes and macrophage–tumor interaction axes among different lineages of pituitary neuroendocrine tumors

    Pituitary neuroendocrine tumors (PitNETs) are common gland neoplasms demonstrating distinctive transcription factors. Although the role of immune cells in PitNETs has been widely recognized, the precise immuno...

    Shaojian Lin, Yuting Dai, Changxi Han, Tianyi Han, Linfeng Zhao in Genome Medicine (2024)

  3. Article

    Open Access

    Single-cell RNA sequencing reveals cellular and molecular landscape of fetal cystic hygroma

    The molecular mechanism of fetal cystic hygroma (CH) is still unclear, and no study has previously reported the transcriptome changes of single cells in CH. In this study, single-cell transcriptome sequencing ...

    Fang Fu, **n Yang, Ru Li, Yingsi Li, Hang Zhou, Ken Cheng in BMC Medical Genomics (2024)

  4. No Access

    Article

    Identification of Key lncRNAs in Gout Under Copper Death and Iron Death Mechanisms: A Study Based on ceRNA Network Analysis and Random Forest Algorithm

    This study focused on identifying potential key lncRNAs associated with gout under the mechanisms of copper death and iron death through ceRNA network analysis and Random Forest (RF) algorithm, which aimed to ...

    Zi-Chen Shao, Wei-Kang Sun, Qin-Qin Deng, Ling Cheng, **n Huang in Molecular Biotechnology (2024)

  5. No Access

    Article

    PdmIRD: missense variants pathogenicity prediction for inherited retinal diseases in a disease-specific manner

    Accurate discrimination of pathogenic and nonpathogenic variation remains an enormous challenge in clinical genetic testing of inherited retinal diseases (IRDs) patients. Computational methods for predicting v...

    Bing Zeng, Dong Cheng Liu, Jian Guo Huang, **ao Bo **a, Bo Qin in Human Genetics (2024)

  6. No Access

    Article

    Bioinformatics Analysis and Experimental Validation of Differential Genes and Pathways in Bone Nonunions

    Non-union fractures pose a significant clinical challenge, often leading to prolonged pain and disability. Understanding the molecular mechanisms underlying non-union fractures is crucial for develo** effect...

    Wei **ong, **ng-Li Shu, Lv Huang, Su-Qi He, Lang-Hui Liu, Song Li in Biochemical Genetics (2024)

  7. No Access

    Article

    The osteoporosis susceptibility SNP rs188303909 at 2q14.2 regulates EN1 expression by modulating DNA methylation and E2F6 binding

    EN1 encodes a homeodomain-containing transcription factor and is a determinant of bone density and fracture. Previous powerful genome-wide association studies (GWASs) have identified multiple single-nucleotide po...

    Ya Wang, **nyao Huang, Qiongdan Zhang, Chen Cheng in Journal of Molecular Medicine (2024)

  8. Article

    Open Access

    Integrated analysis identifies GABRB3 as a biomarker in prostate cancer

    Treatment failure following androgen deprivation therapy (ADT) presents a significant challenge in the management of advanced prostate cancer. Thus, understanding the genetic factors influencing this process c...

    Jun-Yan Chen, Chi-Fen Chang, Shu-Pin Huang, Chao-Yuan Huang in BMC Medical Genomics (2024)

  9. No Access

    Article

    Development of a TLR-Based Model That Can Predict Prognosis, Tumor Microenvironment, and Drug Response for Esophageal Squamous Cell Carcinoma

    The toll-like receptor (TLR) family is an important class of proteins involved in the immune response. However, little is known about the association between TLRs and Esophageal squamous cell cancer (ESCC). We...

    Tao Cheng, **aolong Huang, Huiqin Yang, Jie Gu, Chunlai Lu in Biochemical Genetics (2024)

  10. Article

    Open Access

    Quantitative thresholds for variant enrichment in 13,845 cases: improving pathogenicity classification in genetic hearing loss

    The American College of Medical Genetics and Genomics (ACMG)/Association for Molecular Pathology (AMP) guidelines recommend using variant enrichment among cases as "strong" evidence for pathogenicity per the P...

    Sihan Liu, Mingjun Zhong, Yu Huang, Qian Zhang, Ting Chen, **aofei Xu in Genome Medicine (2023)

  11. Article

    Open Access

    Prenatal diagnosis and perinatal outcomes of twin pregnancies disharmonious for one fetus with nuchal translucency above the 95th percentile

    To assess prenatal diagnosis and pregnancy outcomes in twin pregnancies where one fetus has nuchal translucency (NT) above the 95th percentile.

    You Wang, Hang Zhou, Fang Fu, Ken Cheng, Ruibin Huang, Ru Li in Molecular Cytogenetics (2023)

  12. Article

    Open Access

    Decreased B4GALT1 promotes hepatocellular carcinoma cell invasiveness by regulating the laminin-integrin pathway

    Beta1,4-galactosyltransferases (B4GALTs) play a crucial role in several diseases, including cancer. B4GALT1 is highly expressed in the liver, and patients with mutations in B4GALT1 exhibit hepatopathy. However, t...

    Po-Da Chen, Ying-Yu Liao, Yu-Chia Cheng, Hsin-Yi Wu, Yao-Ming Wu in Oncogenesis (2023)

  13. No Access

    Article

    Live motile sperm sorting device for enhanced sperm-fertilization competency: comparative analysis with density-gradient centrifugation and microfluidic sperm sorting

    A live motile sperm sorting device (LensHooke® CA0) developed to prevent the deleterious effects of centrifugation was evaluated comparatively with conventional density-gradient centrifugation (DGC) and microflui...

    Cheng-Teng Hsu, Chun-I. Lee, Fong-Sian Lin in Journal of Assisted Reproduction and Genet… (2023)

  14. No Access

    Article

    QTL map** and identification of candidate genes for cold tolerance at the germination stage in wild rice

    Cold damage stress significantly affects rice growth (germination and seedling) and causes serious losses in yield in temperate and high-altitude areas around the globe.

    Ying-Hua Pan, Bao-Xuan Nong, Lei Chen, **ng-Hai Yang, **u-Zhong **a in Genes & Genomics (2023)

  15. No Access

    Article

    Suppression of bone metastatic castration-resistant prostate cancer cell growth by a suicide gene delivered by JC polyomavirus-like particles

    Prostate cancer is one of the most common cancers in men. The heterogeneity and mutations exhibited by prostate cancer cells often results in the progression to incurable metastatic castration-resistant prosta...

    Cheng-Huang Shen, Mien-Chun Lin, Chiung-Yao Fang, Pei-Lain Chen in Gene Therapy (2023)

  16. No Access

    Article

    Prenatal diagnosis in the fetal hyperechogenic kidneys: assessment using chromosomal microarray analysis and exome sequencing

    Fetal hyperechogenic kidneys (HEK) is etiologically a heterogeneous disorder. The aim of this study was to identify the genetic causes of HEK using prenatal chromosomal microarray analysis (CMA) and exome sequ...

    Ruibin Huang, Fang Fu, Hang Zhou, Lu Zhang, Tingying Lei, Ken Cheng in Human Genetics (2023)

  17. Article

    Open Access

    The pseudokinase NRBP1 activates Rac1/Cdc42 via P-Rex1 to drive oncogenic signalling in triple-negative breast cancer

    We have determined that expression of the pseudokinase NRBP1 positively associates with poor prognosis in triple negative breast cancer (TNBC) and is required for efficient migration, invasion and proliferatio...

    Xue Yang, Miguel I. Cruz, Elizabeth V. Nguyen, Cheng Huang in Oncogene (2023)

  18. Article

    Open Access

    Distinct DNA methylation signatures associated with blood lipids as exposures or outcomes among survivors of childhood cancer: a report from the St. Jude lifetime cohort

    DNA methylation (DNAm) plays an important role in lipid metabolism, however, no epigenome-wide association study (EWAS) of lipid levels has been conducted among childhood cancer survivors. Here, we performed E...

    Qian Dong, Cheng Chen, Nan Song, Na Qin, Noel-Marie Plonski in Clinical Epigenetics (2023)

  19. No Access

    Article

    Adjustment for the Age- and Gender-Related Metabolic Changes Improves the Differential Diagnosis of Parkinsonism

    Age and gender are the important factors for brain metabolic declines in both normal aging and neurodegeneration, and the confounding effects may influence early and differential diagnosis of neurodegenerative...

    Jiaying Lu, Min Wang, ** Wu, Igor Yakushev, Huiwei Zhang, Sibylle Ziegler in Phenomics (2023)

  20. No Access

    Chapter

    Update on Regulation of Regenerative Medicine in Taiwan

    Due to rapid development of biotechnology in recent years, the field of regenerative medicine has attracted considerable attention. Regenerative medicine–related regulations have been established in several co...

    Wan-Yu Chao, Yi-Ting Chang, Yueh-Tung Tsai in Regulatory Aspects of Gene Therapy and Cel… (2023)

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