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  1. Article

    Open Access

    Genome-wide analysis of MYB transcription factor family and AsMYB1R subfamily contribution to ROS homeostasis regulation in Avena sativa under PEG-induced drought stress

    The myeloblastosis (MYB) transcription factor (TF) family is one of the largest and most important TF families in plants, playing an important role in a life cycle and abiotic stress.

    Yang Chen, Aixue Li, ** Yun, Quan Chen, Dayu Pan, Rui Guo, Han Zhang in BMC Plant Biology (2024)

  2. Article

    Open Access

    Genome sequence of Fusarium oxysporum strain ByF01, the causal agent of root rot of Knoxia roxburghii in China

    Knoxia roxburghii is a member of the madder (Rubiaceae) family. This plant is cultivated in different areas of China and recognized for its medicinal properties, which leads to its use in traditional Chinese medi...

    Chunju Liu, Zhaohui Guo, Lei Zhang, Jiahong Dong, **ahong He, Heng Li in BMC Genomic Data (2024)

  3. Article

    Open Access

    HAX-1 interferes in assembly of NLRP3-ASC to block microglial pyroptosis in cerebral I/R injury

    Acute cerebral ischemia has a high rate of disability and death. Although timely recanalization therapy may rescue the ischemic brain tissue, cerebral ischemia-reperfusion injury has been shown to limit the th...

    **n-bin Guo, **n Deng, **g**g Wang, Yuruo Qi, Wen Zhao in Cell Death Discovery (2024)

  4. No Access

    Article

    Metagenomic analysis of individual mosquito viromes reveals the geographical patterns and drivers of viral diversity

    Mosquito transmitted viruses are responsible for an increasing burden of human disease. Despite this, little is known about the diversity and ecology of viruses within individual mosquito hosts. Here, using a ...

    Yuan-Fei Pan, Hailong Zhao, Qin-Yu Gou, Pei-Bo Shi in Nature Ecology & Evolution (2024)

  5. No Access

    Article

    Effects of parental nutritional programming on the hatching parameters, metabolome, glucose metabolism-related gene expressions, and global DNA methylation in larvae of yellow catfish Tachysurus fulvidraco

    Nutritional programming has the potential to enhance digestible carbohydrate utilization in fish; however, the underlying mechanisms remain unclear. The present study compared the metabolome, glucose metabolis...

    Wen-Bin Xu, Li-Guo Yang, Qing-Ji Zhang, Yu-Shi Chen in Aquaculture International (2024)

  6. Article

    Open Access

    Aberrant activated Notch1 promotes prostate enlargement driven by androgen signaling via disrupting mitochondrial function in mouse

    The prostate is a vital accessory gonad in the mammalian male reproductive system. With the ever-increasing proportion of the population over 60 years of age worldwide, the incidence of prostate diseases, such...

    **-Wen Kang, Jia-Peng He, Ying-Nan Liu, Yu Zhang in Cellular and Molecular Life Sciences (2024)

  7. Article

    Open Access

    Genome-wide analysis of the KNOX gene family in Moso bamboo: insights into their role in promoting the rapid shoot growth

    KNOTTED1-like homeobox (KNOX) genes, plant-specific homologous box transcription factors (TFs), play a central role in regulating plant growth, development, organ formation, and response to biotic and abiotic str...

    Yang Jiao, Jiaqi Tan, Hui Guo, Bin Huang, Yeqing Ying in BMC Plant Biology (2024)

  8. No Access

    Article

    Kinase PIM1 governs ferroptosis to reduce retinal microvascular endothelial cell dysfunction triggered by high glucose

    Previous studies have implicated targeting Pim-1 proto-oncogene, serine/threonine kinase (PIM1) as a preventive measure against high glucose–induced cellular stress and apoptosis. This study aimed to reveal th...

    Hong-bin **e, Jun-hong Guo, Ming-min Yang in In Vitro Cellular & Developmental Biology … (2024)

  9. No Access

    Article

    Metabolism, antioxidant and immunity in acute and chronic hypoxic stress and the improving effect of vitamin C in the channel catfish (Ictalurus punctatus)

    Hypoxia is the most significant factor that threatens the health and even survival of freshwater and marine fish. Priority should be given to the investigation of hypoxia adaptation mechanisms and their subseq...

    Kang **ao, ** Wang, Mang-mang Wang, Hui-**ng Guo in Fish Physiology and Biochemistry (2024)

  10. No Access

    Article

    Interactive effects of dietary leucine and isoleucine affect amino acid profile and metabolism through AKT/TOR signaling pathways in blunt snout bream (Megalobrama amblycephala)

    The purpose of this research is to explore the interaction between dietary leucine and isoleucine levels on whole-body composition, plasma and liver biochemical indexes, amino acids deposition in the liver, an...

    Mang-mang Wang, Yang-yang Huang, Wen-bin Liu, Kang **ao in Fish Physiology and Biochemistry (2024)

  11. No Access

    Article

    Auto-suppression of Tet dioxygenases protects the mouse oocyte genome from oxidative demethylation

    DNA cytosine methylation plays a vital role in repressing retrotransposons, and such derepression is linked with developmental failure, tumorigenesis and aging. DNA methylation patterns are formed by precisely...

    **ao-Jie Zhang, Bin-Bin Han, Zhen-Yu Shao, Rui Yan in Nature Structural & Molecular Biology (2024)

  12. No Access

    Article

    Vector-mediated viral exchange between crops and weedy plants

    While virus-vector-crop interactions have received considerable attention, free-living plants growing in cultivated areas (‘weeds’) can also serve as viral reservoirs. Although weed-to-crop transmission is wel...

    **ao-bin Shi, Zhuo Zhang, Fan Li, Evan L. Preisser in Journal of Pest Science (2024)

  13. Article

    Open Access

    scInterpreter: a knowledge-regularized generative model for interpretably integrating scRNA-seq data

    The rapid emergence of single-cell RNA-seq (scRNA-seq) data presents remarkable opportunities for broad investigations through integration analyses. However, most integration models are black boxes that lack i...

    Zhen-Hao Guo, Yan Wu, Siguo Wang, Qinhu Zhang, **-Ming Shi in BMC Bioinformatics (2023)

  14. No Access

    Article

    High-fat diet alters intestinal microbiota and induces endoplasmic reticulum stress via the activation of apoptosis and inflammation in blunt snout bream

    The primary organ for absorbing dietary fat is the gut. High dietary lipid intake negatively affects health and absorption by causing fat deposition in the intestine. This research explores the effect of a hig...

    Kenneth Prudence Abasubong, Guang-Zhen Jiang in Fish Physiology and Biochemistry (2023)

  15. Article

    Open Access

    Ferroptosis sensitization in glioma: exploring the regulatory mechanism of SOAT1 and its therapeutic implications

    Glioma, the most common primary malignant tumor of the central nervous system, lacks effective targeted therapies. This study investigates the role of SOAT1, a key gene involved in cholesterol esterification, ...

    Shicheng Sun, Guoliang Qi, Hao Chen, Dong He, Dengzhen Ma in Cell Death & Disease (2023)

  16. No Access

    Article

    PARylated PDHE1α generates acetyl-CoA for local chromatin acetylation and DNA damage repair

    Chromatin relaxation is a prerequisite for the DNA repair machinery to access double-strand breaks (DSBs). Local histones around the DSBs then undergo prompt changes in acetylation status, but how the large de...

    Jun Zhang, Feng Chen, Yuan Tian, Wenchao Xu in Nature Structural & Molecular Biology (2023)

  17. Article

    Open Access

    Low glucose metabolite 3-phosphoglycerate switches PHGDH from serine synthesis to p53 activation to control cell fate

    Glycolytic intermediary metabolites such as fructose-1,6-bisphosphate can serve as signals, controlling metabolic states beyond energy metabolism. However, whether glycolytic metabolites also play a role in co...

    Yu-Qing Wu, Chen-Song Zhang, **ye **ong, Dong-Qi Cai, Chen-Zhe Wang in Cell Research (2023)

  18. Article

    Open Access

    ATGL deficiency aggravates pressure overload-triggered myocardial hypertrophic remodeling associated with the proteasome-PTEN-mTOR-autophagy pathway

    Persistent myocardial hypertrophy frequently leads to heart failure (HF). Intramyocardial triacylglycerol (TAG) accumulation is closely related with cardiac remodeling and abnormal contractile function. Adipos...

    **ao Han, Yun-Long Zhang, Qiu-Yue Lin, Hui-Hua Li in Cell Biology and Toxicology (2023)

  19. Article

    Open Access

    Effect of using reclaimed water via furrow and subsurface drip systems under alternate partial root-zone irrigation mechanism on crops growth and soil properties

    The growing population in the face of water scarcity inevitably necessitates the quest for alternative sources of irrigation water, which integrates them with irrigation strategies for improved agricultural pr...

    Mahmoud S. Hashem, Wei Guo, Xue-Bin Qi, ** Li, Ying-jun She in Irrigation Science (2023)

  20. No Access

    Article

    Lin28a maintains a subset of adult muscle stem cells in an embryonic-like state

    During homeostasis and after injury, adult muscle stem cells (MuSCs) activate to mediate muscle regeneration. However, much remains unclear regarding the heterogeneous capacity of MuSCs for self-renewal and re...

    Peng Wang, Xupeng Liu, Ziyue Yao, Yu Chen, Lanfang Luo, Kun Liang in Cell Research (2023)

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