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CD87-targeted BiTE and CAR-T cells potently inhibit invasive nonfunctional pituitary adenomas

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  1. Article

    Open Access

    Recent advances in the pathogenesis and prevention strategies of dental calculus

    Dental calculus severely affects the oral health of humans and animal pets. Calculus deposition affects the gingival appearance and causes inflammation. Failure to remove dental calculus from the dentition res...

    Yu Wei, Gao-peng Dang, Zhao-yang Ren, Mei-chen Wan in npj Biofilms and Microbiomes (2024)

  2. Article

    Open Access

    Estimating the total variance explained by whole-brain imaging for zero-inflated outcomes

    There is a dearth of statistical models that adequately capture the total signal attributed to whole-brain imaging features. The total signal is often widely distributed across the brain, with individual imagi...

    Junting Ren, Robert Loughnan, Bohan Xu, Wesley K. Thompson in Communications Biology (2024)

  3. Article

    Open Access

    Constructing lncRNA-miRNA-mRNA networks specific to individual cancer patients and finding prognostic biomarkers

    The competitive endogenous RNA (ceRNA) hypothesis suggests that microRNAs (miRNAs) mediate a regulatory relation between long noncoding RNAs (lncRNAs) and messenger RNAs (mRNAs) which share similar miRNA respo...

    Shulei Ren, Wook Lee, Byungkyu Park, Kyungsook Han in BMC Genomic Data (2024)

  4. Article

    Open Access

    Predicting intercellular communication based on metabolite-related ligand-receptor interactions with MRCLinkdb

    Metabolite-associated cell communications play critical roles in maintaining human biological function. However, most existing tools and resources focus only on ligand-receptor interaction pairs where both par...

    Yuncong Zhang, Yu Yang, Li** Ren, Meixiao Zhan, Tao** Sun, Quan Zou in BMC Biology (2024)

  5. Article

    Open Access

    Systematic comparison of sequencing-based spatial transcriptomic methods

    Recent developments of sequencing-based spatial transcriptomics (sST) have catalyzed important advancements by facilitating transcriptome-scale spatial gene expression measurement. Despite this progress, effor...

    Yue You, Yuting Fu, Lanxiang Li, Zhongmin Zhang, Shikai Jia, Shihong Lu in Nature Methods (2024)

  6. Article

    Open Access

    Correction: Phosphorylation of PFKFB4 by PIM2 promotes anaerobic glycolysis and cell proliferation in endometriosis

    Chao Lu, Pengyun Qiao, Ruihai Fu, Yadi Wang, Jiayi Lu, ** Ling in Cell Death & Disease (2024)

  7. Article

    Open Access

    Systematic assessment of long-read RNA-seq methods for transcript identification and quantification

    The Long-read RNA-Seq Genome Annotation Assessment Project Consortium was formed to evaluate the effectiveness of long-read approaches for transcriptome analysis. Using different protocols and sequencing platf...

    Francisco J. Pardo-Palacios, Dingjie Wang, Fairlie Reese, Mark Diekhans in Nature Methods (2024)

  8. Article

    Open Access

    Rare variant analyses validate known ALS genes in a multi-ethnic population and identifies ANTXR2 as a candidate in PLS

    Amyotrophic lateral sclerosis (ALS) is a neurodegenerative disease affecting over 300,000 people worldwide. It is characterized by the progressive decline of the nervous system that leads to the weakening of m...

    Tess D. Pottinger, Joshua E. Motelow, Gundula Povysil in BMC Genomics (2024)

  9. Article

    Open Access

    Transcriptome profiling of fast/glycolytic and slow/oxidative muscle fibers in aging and obesity

    Aging and obesity pose significant threats to public health and are major contributors to muscle atrophy. The trends in muscle fiber types under these conditions and the transcriptional differences between dif...

    Feng-Min Zhang, Hao-Fan Wu, Ke-Fan Wang, Ding-Ye Yu in Cell Death & Disease (2024)

  10. Article

    Open Access

    Dexmedetomidine improves the circulatory dysfunction of the glymphatic system induced by sevoflurane through the PI3K/AKT/ΔFosB/AQP4 pathway in young mice

    Multiple sevoflurane exposures may damage the develo** brain. The neuroprotective function of dexmedetomidine has been widely confirmed in animal experiments and human studies. However, the effect of dexmede...

    Shuying Wang, **ao** Yu, Lili Cheng, Weishu Ren, Gehua Wen, Xue Wu in Cell Death & Disease (2024)

  11. Article

    Open Access

    Identification of metastasis-related genes for predicting prostate cancer diagnosis, metastasis and immunotherapy drug candidates using machine learning approaches

    Prostate cancer (PCa) is the second leading cause of tumor-related mortality in men. Metastasis from advanced tumors is the primary cause of death among patients. Identifying novel and effective biomarkers is ...

    YaXuan Wang, Bo Ji, Lu Zhang, **feng Wang, Jia**n He, BeiChen Ding in Biology Direct (2024)

  12. Article

    Open Access

    A comprehensive workflow for optimizing RNA-seq data analysis

    Current RNA-seq analysis software for RNA-seq data tends to use similar parameters across different species without considering species-specific differences. However, the suitability and accuracy of these tool...

    Gao Jiang, Juan-Yu Zheng, Shu-Ning Ren, Weilun Yin, **nli **a, Yun Li in BMC Genomics (2024)

  13. Article

    Open Access

    Multiomics integration-based immunological characterizations of adamantinomatous craniopharyngioma in relation to keratinization

    Although adamantinomatous craniopharyngioma (ACP) is a tumour with low histological malignancy, there are very few therapeutic options other than surgery. ACP has high histological complexity, and the unique f...

    Chunming Xu, Jie Wu, Jiye Ye, Yuancheng Si, **shi Zhang, Bowen Wu in Cell Death & Disease (2024)

  14. Article

    Open Access

    Comparative genomics of the primary endosymbiont Buchnera aphidicola in aphid hosts and their coevolutionary relationships

    Coevolution between modern aphids and their primary obligate, bacterial endosymbiont, Buchnera aphidicola, has been previously reported at different classification levels based on molecular phylogenetic analyses....

    Yukang Liang, Rebecca B. Dikow, Xu Su, Jun Wen, Zhumei Ren in BMC Biology (2024)

  15. Article

    Open Access

    Transcriptome analyses of Acer Truncatum Bunge seeds to delineate the genes involved in fatty acid metabolism

    Acer truncatum Bunge is an economic, ecological, oil, and medicinal tree, and its kernel oil is rich in nervonic acid. It is crucial to explore the transcriptional expression patterns of genes affecting fatty aci...

    Li** Yan, Hongcheng Fang, Yan Liang, Yinhua Wang, Fei Ren, **aoman **e in BMC Genomics (2024)

  16. Article

    Open Access

    Heat stress induces calcium dyshomeostasis to subsequent cognitive impairment through ERS-mediated apoptosis via SERCA/PERK/eIF2α pathway

    Heat exposure is an environmental stressor that has been associated with cognitive impairment. However, the neural mechanisms that underlie this phenomenon have yet to be extensively investigated. The Morris w...

    Hongxia Li, Wenlan Pan, Chenqi Li, Mengyu Cai, Wen**g Shi in Cell Death Discovery (2024)

  17. Article

    Open Access

    An oncogenic role of lncRNA SNHG1 promotes ATG7 expression and autophagy involving tumor progression and sunitinib resistance of Renal Cell Carcinoma

    Renal cell carcinoma (RCC) is a malignant tumor with high incidence in adult kidney. Long non-coding RNAs (lncRNAs) have recently been recognized as important regulators in the development of RCC. However, whe...

    Pei Tian, **xing Wei, **g Li, Junkai Ren, Chaohong He in Cell Death Discovery (2024)

  18. Article

    Open Access

    Potential role of salivary lactic acid bacteria in pathogenesis of oral lichen planus

    Emerging evidence emphasized the role of oral microbiome in oral lichen planus (OLP). To date, no dominant pathogenic bacteria have been identified consistently. It is noteworthy that a decreased abundance of Str...

    **aomeng Ren, Dan Li, Mimi Zhou, Hong Hua, Chunlei Li in BMC Microbiology (2024)

  19. Article

    Open Access

    Identification and molecular map** of resistance genes for adult-plant resistance to stripe rust in spring wheat germplasm line PI660076

    Wheat is one of the major food crops worldwide. Stripe rust can cause a great loss of wheat yield, especially when the disease is prevalent. Chemical control not only causes the loss of resistance to stripe ru...

    Runsheng Ren, Jianian Zhou, Yuqi Wang in Food Production, Processing and Nutrition (2024)

  20. Article

    Open Access

    Cold atom microwave clock based on intracavity cooling in China space station

    Atomic clocks with higher frequency stability and accuracy than traditional space-borne atomic clocks are the cornerstone of long-term autonomous operation of space-time-frequency systems. We proposed a space ...

    Siminda Deng, Wei Ren, **gfeng **ang, Jianbo Zhao, Lin Li, Di Zhang in npj Microgravity (2024)

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