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  1. No Access

    Chapter and Conference Paper

    Electromagnetic-Induced Calcium Signal with Network Coding for Molecular Communications

    Molecular communication (MC) has become a new communication technology between nano-scale devices due to its biocompatibility and low energy consumption. Calcium signaling gradually becomes a hot research topi...

    Mengnan Su, Peng He in Bio-inspired Information and Communications Technologies (2023)

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    Chapter and Conference Paper

    An Accurate Algorithm for Identifying Mutually Exclusive Patterns on Multiple Sets of Genomic Mutations

    In cancer genomics, the mutually exclusive patterns of somatic mutations are important biomarkers that are suggested to be valuable in cancer diagnosis and treatment. However, detecting these patterns of mutat...

    Siyu He, Jiayin Wang, Zhongmeng Zhao in Bioinformatics and Biomedical Engineering (2023)

  3. No Access

    Chapter and Conference Paper

    Multi-class Cancer Classification of Whole Slide Images Through Transformer and Multiple Instance Learning

    Whole slide images (WSIs) are high-resolution and lack localized annotations, whose classification can be treated as a multiple instance learning (MIL) problem while slide-level labels are available. We introd...

    Hai**g Luan, Taiyuan Hu, Jifang Hu, Ruilin Li in Bioinformatics Research and Applications (2023)

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    Chapter and Conference Paper

    Screening of Key Genes in Retinoblastoma and Construction of ceRNA Regulatory Network

    Retinoblastoma (RB) is an intraocular malignancy with a high incidence and very severe symptoms in children and is a rare life-threatening ophthalmic disease. Screening for key genes in retinoblastoma to ident...

    Jiaxin Guo, Yize Liu, Fu Li, Rong Qin in Biomedical and Computational Biology (2023)

  5. No Access

    Chapter and Conference Paper

    Research Progress and Prospect of Tachypleus Amebocyte Lysate in China

    Tachypleus amebocyte lysate (TAL) is an endotoxin test reagent made from the blood of the Tachypleus horseshoe crab species. TAL is internationally recognized as the most sensitive bacterial endotoxin detection p...

    Chang Liu, **mei Liu, Youji Wang, Jie Song in International Horseshoe Crab Conservation … (2022)

  6. No Access

    Chapter and Conference Paper

    A Rule-Based Approach for Generating Synthetic Biological Pathways

    Deep learning has recently enabled many advances for computer vision applications in image recognition, localization, segmentation, and understanding. However, applying deep learning models to a wider variety ...

    Joshua Thompson, Haoyu Dong, Kai Liu, Fei He in Computational Intelligence Methods for Bio… (2022)

  7. No Access

    Chapter and Conference Paper

    Feasibility of Non-invasive Measurement of Tumour NAD(H) by In Vivo Phosphorus-31 Magnetic Resonance Spectroscopy

    Importance of the redox status of nicotinamide adenine dinucleotide (NAD), including its oxidized (NAD+) and reduced (NADH) forms, has been shown in many biological processes. However, NAD(H) redox status assessm...

    Kavindra Nath, Fernando Arias-Mendoza, He N. Xu in Oxygen Transport to Tissue XLIII (2022)

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    Chapter and Conference Paper

    Text Mining Enhancements for Image Recognition of Gene Names and Gene Relations

    The volume of the biological literature has been increasing fast, which leads to a rapid growth of biological pathway figures included in the related biological papers. Each pathway figure encompasses rich bio...

    Yijie Ren, Fei He, **g Qu, Yifan Li in Computational Intelligence Methods for Bio… (2022)

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    Chapter and Conference Paper

    Optical Redox Imaging Is Responsive to TGFβ Receptor Signalling in Triple-Negative Breast Cancer Cells

    Co-enzyme nicotinamide adenine dinucleotide NAD(H) regulates hundreds of biochemical reactions within the cell. We previously reported that NAD(H) redox status may have prognostic value for predicting breast c...

    He N. Xu, Annemarie Jacob, Lin Z. Li in Oxygen Transport to Tissue XLIII (2022)

  10. No Access

    Chapter and Conference Paper

    Assessment of Nicotinamide Adenine Dinucleotide in Human Tissues by In Vivo Phosphorus-31 Magnetic Resonance Spectroscopic Imaging at 1.5 Tesla

    As a phosphorus-containing molecule, nicotinamide adenine dinucleotide is visible by phosphorus magnetic resonance spectroscopy (31P-MRS). However, the relatively low cellular levels of its oxidised (NAD+) and re...

    Fernando Arias-Mendoza, Kavindra Nath, He N. Xu in Oxygen Transport to Tissue XLIII (2022)

  11. No Access

    Chapter and Conference Paper

    Asian Horseshoe Crab Conservation: Knowledge, Attitudes, and Intentions of Local College Students in Northern Beibu Gulf, China

    Asian horseshoe crabs are declining throughout their geographic range, particularly in the Beibu Gulf that harbors the world’s most abundant population of tri-spine horseshoe crab, Tachypleus tridentatus. Communi...

    Zhou Wu, Shuyan Huang, Yijian Fu, Junfu He in International Horseshoe Crab Conservation … (2022)

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    Chapter and Conference Paper

    Improving Protein-protein Interaction Prediction by Incorporating 3D Genome Information

    Numerous computational methods have been proposed to predict protein-protein interactions, none of which however, considers the original DNA loci of the interacting proteins in the perspective of 3D genome. He...

    Zehua Guo, Kai Su, Liangjie Liu, **anbin Su in Bioinformatics Research and Applications (2021)

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    Chapter and Conference Paper

    A Deep Learning Approach Based on Feature Reconstruction and Multi-dimensional Attention Mechanism for Drug-Drug Interaction Prediction

    Drug-drug interactions occur when two or more drugs are taken simultaneously or successively. Early discovery of drug-drug interactions can effectively prevent medical accidents and reduce medical costs. There...

    Jiang **e, Jiaming Ouyang, Chang Zhao in Bioinformatics Research and Applications (2021)

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    Chapter and Conference Paper

    HGDD: A Drug-Disease High-Order Association Information Extraction Method for Drug Repurposing via Hypergraph

    Traditional drug research and development (R&D) methods are characterized by high risk and...

    Shanchen Pang, Kuijie Zhang, Shudong Wang in Bioinformatics Research and Applications (2021)

  15. No Access

    Chapter and Conference Paper

    Joint CC and Bimax: A Biclustering Method for Single-Cell RNA-Seq Data Analysis

    One of the important aims of analyzing single-cell RNA sequencing (scRNA-seq) data is to discovery new cell subtypes by clustering. For the scRNA-seq data, it is obvious that lots of genes have similar behavio...

    He-Ming Chu, **ang-Zhen Kong, **-**ng Liu in Bioinformatics Research and Applications (2021)

  16. No Access

    Chapter and Conference Paper

    Electromagnetism-Enabled Transmitter of Molecular Communications Using Ca \(^{2+}\) Signals

    Molecular Communications provides a promising solution to achieve precise control and process of bio-things in applications of Healthcare-IoT. In this paper, we investigates the mechanism of electromagnetism-i...

    Peng He, Donglai Tang in Bio-Inspired Information and Communications Technologies (2021)

  17. Chapter and Conference Paper

    Assessing Potassium Mass Balances in Different Countries and Scales

    Estimating nutrient mass balances using information on nutrient additions and removals generates useful, practical information on the nutrient status of a soil or area. A negative input–output balance of nutri...

    Kaushik Majumdar, Robert M. Norton in Improving Potassium Recommendations for Ag… (2021)

  18. No Access

    Chapter and Conference Paper

    Intelligent Power Controller of Wireless Body Area Networks Based on Deep Reinforcement Learning

    Wireless Body Area networks allow groups of tiny sensors to communicate for purpose of medical applications. With the progress of sensor manufacture and artificial intelligence, abundant wearing devices are pr...

    Peng He, Zhenli Liu, Lei Fu, Zhongyuan Tao in Bio-inspired Information and Communication… (2020)

  19. No Access

    Chapter and Conference Paper

    Anti-Cancer Mechanisms of Taurine in Human Nasopharyngeal Carcinoma Cells

    Taurine displays anti-tumor activity in some kinds of human cancers. However, the underlying mechanisms are poorly understood. Epstein-Barr virus-related nasopharyngeal carcinoma (NPC) is a distinctive type of...

    Feng He, Ning Ma, Kaoru Midorikawa, Yusuke Hiraku, Shinji Oikawa, Yingxi Mo in Taurine 11 (2019)

  20. Chapter and Conference Paper

    Proposal of International Gluten Research Group

    In a scenario of climate change and rapidly rising urban populations demanding processed foods, it is necessary to develop new wheat cultivars combining high yield potential, disease resistance, and stability ...

    Tatsuya M. Ikeda, W. John Rogers in Advances in Wheat Genetics: From Genome to… (2015)

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