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  1. Early Detection of Potato Disease Using an Enhanced Convolutional Neural Network-Long Short-Term Memory Deep Learning Model

    Potato diseases pose a significant threat to farmers, impacting potato crops’ productivity, quality, and financial stability. Among the most...

    Sarah A. Alzakari, Amel Ali Alhussan, ... Ahmed M. Elshewey in Potato Research
    Article 08 July 2024
  2. Identification, validation and candidate gene analysis of major QTL for Supernumerary spikelets in wheat

    Background

    The number of spikelets per spike is a key trait that affects the yield of bread wheat ( Triticum aestivum L.). Identification of the QTL...

    Zhiqiang Wang, Haojie Li, ... Yaxi Liu in BMC Genomics
    Article Open access 08 July 2024
  3. Purifying selection drove the adaptation of mitochondrial genes along with correlation of gene rearrangements and evolutionary rates in two subfamilies of Whitefly (Insecta: Hemiptera)

    Insect mitochondrial genomes (mitogenomes) are usually represented by a conserved gene order. Whiteflies exhibit gene rearrangement in their...

    Abhishek Ghosh, Kaomud Tyagi, ... Vikas Kumar in Functional & Integrative Genomics
    Article 08 July 2024
  4. A pan-cancer analysis unveiling the function of NR4A family genes in tumor immune microenvironment, prognosis, and drug response

    Background

    NR4A family genes play crucial roles in cancers. However, the role of NR4A family genes in cancers remains paradoxical as they promote or...

    Seong-Woo Park, Mi-Ryung Han in Genes & Genomics
    Article 08 July 2024
  5. Integrated proteomic and metabolomic profiling reveals novel insights on the inflammation and immune response in HFpEF

    Background

    The precise mechanisms leading to the development of heart failure with preserved ejection fraction (HFpEF) remain incompletely defined. In...

    Muyashaer Abudurexiti, Refukaiti Abuduhalike, ... Ailiman Mahemuti in BMC Genomics
    Article Open access 08 July 2024
  6. Panpipes: a pipeline for multiomic single-cell and spatial transcriptomic data analysis

    Single-cell multiomic analysis of the epigenome, transcriptome, and proteome allows for comprehensive characterization of the molecular circuitry...

    Fabiola Curion, Charlotte Rich-Griffin, ... Calliope A. Dendrou in Genome Biology
    Article Open access 08 July 2024
  7. Detection of allele-specific expression in spatial transcriptomics with spASE

    Spatial transcriptomics technologies permit the study of the spatial distribution of RNA at near-single-cell resolution genome-wide. However, the...

    Luli S. Zou, Dylan M. Cable, ... Rafael A. Irizarry in Genome Biology
    Article Open access 08 July 2024
  8. GWAS elucidated grain yield genetics in Indian spring wheat under diverse water conditions

    Key message

    Underpinned natural variations and key genes associated with yield under different water regimes, and identified genomic signatures of...

    Arpit Gaur, Yogesh **dal, ... Sonia Sheoran in Theoretical and Applied Genetics
    Article 07 July 2024
  9. Unveiling novel genetic variants in 370 challenging medically relevant genes using the long read sequencing data of 41 samples from 19 global populations

    Background: A large number of challenging medically relevant genes (CMRGs) are situated in complex or highly repetitive regions of the human genome,...

    Yanfeng Ji, Junfan Zhao, ... Shaohua Fan in Molecular Genetics and Genomics
    Article 07 July 2024
  10. TaqTth-hpRNA: a novel compact RNA-targeting tool for specific silencing of pathogenic mRNA

    Pathogenic allele silencing is a promising treatment for genetic hereditary diseases. Here, we develop an RNA-cleaving tool, TaqTth-hpRNA, consisting...

    Chong Xu, Jiyanuo Cao, ... Shu Xu in Genome Biology
    Article Open access 07 July 2024
  11. Histological analysis of petiole structure in Euphorbiaceae species for taxonomic classification

    The current study was carried out to describe the taxonomic microanatomical traits of petiole micromorphology of Euphorbiaceous species inhabited in...

    Salman Majeed, Muhammad Zafar, ... Muhammad Rizwan Khan in Genetic Resources and Crop Evolution
    Article 07 July 2024
  12. Transcriptomic responses of Mediterranean sponges upon encounter with symbiont microbial consortia

    Background

    Sponges (phylum Porifera) constantly interact with microbes. They graze on microbes from the water column by filter-feeding and they harbor...

    Angela Maria Marulanda-Gomez, Marta Ribes, ... Lucia Pita in BMC Genomics
    Article Open access 07 July 2024
  13. Macronutrients and biochemical compounds' changes in the leaves and corms of the saffron plant (Crocus sativus L.) during the final stages of growth

    This study was carried out to examine how macronutrients and biochemical compounds in the leaves and corms of the saffron plant ( Crocus sativus  L.)...

    Mohammad Elahi Gharabaghlou, Ali Sorooshzadeh, Faezeh Ghanati in Journal of Crop Science and Biotechnology
    Article 06 July 2024
  14. Empirical Gains from Growing Potato Under Contract Farming in Punjab, India

    The persistence of agrarian crises in Punjab state of India has necessitated the policymakers to identify new institutional agri-businesses to make...

    Pavneet Kaur, Naresh Singla in Potato Research
    Article 06 July 2024
  15. Evaluation of nodule traits in USDA guar genotype accessions

    Guar [ Cyamopsis tetragonoloba (L.) Taub] is an annual diploid legume (2 n  = 2 x = 14) crop and is drought and heat tolerant. This crop is primarily...

    Shubham Malani, Waltram Ravelombola, ... Srinivasulu Ale in Euphytica
    Article 06 July 2024
  16. Cannabis leaf arrangement: Transcriptome insights into Cannabis sativa phyllotactic regulation

    Cannabis sativa exhibits notable phyllotactic transitions from opposite to alternate leaf arrangements, frequently coinciding with the shift from...

    Mohsen Hesami, Marco Pepe, ... Andrew Maxwell Phineas Jones in Plant Physiology Reports
    Article 06 July 2024
  17. Potential Yield of Potato Under Global Warming Based on an ARIMA-TR Model

    As an important food crop in the world, potato has been attracting scholarly attention to improve its yield in the future, particularly under climate...

    Cai Chengzhi, Wei Sha, ... Cao Wenfang in Potato Research
    Article 06 July 2024
  18. Development of Rhizoctonia Black Scurf of Potato in Relation to Tuber Borne Inoculum Density, Dehaulming Methods and Curing Time in Northwestern Alluvial Plains of India

    To understand the effect of sclerotial density on tubers, and the method vis-a-vis timing of dehaulming on the development of black scurf, field...

    Sandeep Jain, Ritu Rani, ... Simarjot Kaur in American Journal of Potato Research
    Article 06 July 2024
  19. Comparative Study of High-Temperature Anaerobic Digestion of Municipal Sludge Under Acid/Alkali and Low-Temperature Hydrothermal Synergistic Pretreatment

    Abstract

    The efficiency of anaerobic digestion of sludge can be significantly improved through a combination of acid or alkali hydrolysis with...

    Ying Huang, Baoyan Chi, ... **aoqing Ruan in BioEnergy Research
    Article 06 July 2024
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