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  1. Comprehensive and deep evaluation of structural variation detection pipelines with third-generation sequencing data

    Background

    Structural variation (SV) detection methods using third-generation sequencing data are widely employed, yet accurately detecting SVs...

    Zhi Liu, Zhi **e, Miaoxin Li in Genome Biology
    Article Open access 15 July 2024
  2. Study of hydrodynamic cavitation applied for the selective removal of Escherichia coli and Daphnia sp. present in the cultivation of microalgae in agro-industrial wastewater

    The presence of undesirable microorganisms in wastewater, considered a low-cost medium, can affect the production of biomass as they take nutrients...

    Rosa Atayupanqui Dueñas, Patricia Pacheco Umpire, ... Javier Montalvo Andia in Journal of Applied Phycology
    Article 15 July 2024
  3. Effect of zeolite and irrigation treatments on grapevine leaves, an interdisciplinary approach

    Aims

    Global warming depicts a real challenge for viticulture. As found by PubMed results, a 90% increase in the abiotic stress publications number...

    Eleonora Cataldo, Sergio Puccioni, ... Giovan Battista Mattii in Plant and Soil
    Article Open access 15 July 2024
  4. Potato Yield Classification Using Weather Variables: a Discriminant Analysis Approach

    The study aims to develop a multivariate statistical model to classify potato yield based on weather variables. The potato yields of India from years...

    S. R. Krishna Priya, N. Naranammal, ... Pradeep Mishra in Potato Research
    Article 15 July 2024
  5. Map** of Aegilops speltoides derived leaf rust and stripe rust resistance genes using 35K SNP array

    Wheat is an essential food commodity cultivated throughout the world. However, this crop faces continuous threats from fungal pathogens, leaf rust...

    Balihar Kaur, Bukke Kutti Bai, ... Satinder Kaur in BMC Genomic Data
    Article Open access 15 July 2024
  6. Comparative genomic analysis of nickel homeostasis in cable bacteria

    Background

    Cable bacteria are filamentous members of the Desulfobulbaceae family that are capable of performing centimetre‑scale electron transport...

    Anwar Hiralal, Jeanine S. Geelhoed, ... Filip J. R. Meysman in BMC Genomics
    Article Open access 15 July 2024
  7. Screening microalgae strains for fish feed of juvenile Nile tilapia (Oreochromis niloticus) and their zootechnical performance

    Fishmeal, the main protein source in fish feed, may become unsustainable due to economic and environmental issues in the fishing industry. In this...

    Silvia Pope de Araújo, Layon Carvalho de Assis, ... Anita Ferreira do Valle in Journal of Applied Phycology
    Article 15 July 2024
  8. Association studies of salinity tolerance in sunflower provide robust breeding and selection strategies under climate change

    Phytotoxic soil salinity is a global problem, and in the northern Great Plains and western Canada, salt accumulates on the surface of marine sediment...

    James P. McNellie, William E. May, ... Brent S. Hulke in Theoretical and Applied Genetics
    Article 15 July 2024
  9. Systemic interindividual DNA methylation variants in cattle share major hallmarks with those in humans

    Background

    We recently identified ~ 10,000 correlated regions of systemic interindividual epigenetic variation (CoRSIVs) in the human genome. These...

    Wen-Jou Chang, Maria S. Baker, ... Robert A. Waterland in Genome Biology
    Article Open access 15 July 2024
  10. Potato Consumption Forecasting Based on a Hybrid Stacked Deep Learning Model

    Potato consumption forecasting is crucial for several stakeholders in the food market. Due to the market flexibility, the farmers can manipulate the...

    Marwa Eed, Amel Ali Alhussan, ... Reham Arnous in Potato Research
    Article Open access 15 July 2024
  11. TAG encodes an adenine nucleotide transport protein that regulates leaf color in rice

    Leaf is an important organ of photosynthesis in plants, and leaf color has an important influence on photosynthesis. However, the molecular...

    **nfang Zhang, Wenwen **ao, ... Ting Zhang in Euphytica
    Article 15 July 2024
  12. Heterologous expression of distinct insecticidal genes in potato cultivars encodes resistance against potato tuber moth, Phthorimaea operculella (Zeller) (Lepidoptera: Gelechiidae)

    The potato tuber moth, Phthorimaea operculella (Zeller), is a notorious insect pest of potato incurring substantial yield losses in the field as well...

    Muhammad Salim, Allah Bakhsh, ... Ayhan Gökçe in Journal of Plant Diseases and Protection
    Article Open access 14 July 2024
  13. The importance of variance and microsite conditions for growth and hydraulic responses following long-term rewetting in pedunculate oak wood

    Key message

    Early rewetting influenced growth variability and hydraulic uniformity in Pedunculate oak wood on disturbed peatland. Long-term study...

    Giulia Resente, Alessandro Di Fabio, ... Martin Wilmking in Trees
    Article Open access 14 July 2024
  14. Study on the Co-pyrolysis Behavior of Copper Slag and Pine Sawdust and the Adsorption of Chromium

    The co-pyrolysis behavior of pine sawdust (PS) biochar doped with copper slag (CS) and the adsorption performance of the prepared CS catalyzed...

    Tianxing Zhou, Wanzhen Zhong, ... Dongdong Ren in BioEnergy Research
    Article 14 July 2024
  15. Genomic characterization and virulence gene profiling of Erysipelothrix rhusiopathiae isolated from widespread muskox mortalities in the Canadian Arctic Archipelago

    Background

    Muskoxen are important ecosystem components and provide food, economic opportunities, and cultural well-being for Indigenous communities in...

    Lakshmi Vineesha Seru, Taya L. Forde, ... Susan J. Kutz in BMC Genomics
    Article Open access 14 July 2024
  16. Impact of autochthonous biostimulants on bioactive compounds of date palm vitroplants under salt stress

    In arid and semi-arid areas, the date palm (Phoenix dactylifera L.), plays an important socio-economic role. Nevertheless, in recent years, the whole...

    Salma Toubali, Abdelilah Meddich in Vegetos
    Article 14 July 2024
  17. Prediction and map** the productivity of eucalyptus clones with environmental covariates

    The quantitative nature of wood production poses a challenge for breeders. The complex interaction of genotypes with environments (G×E) makes...

    Leonardo Oliveira Silva da Costa, Izabel Christina Gava de Souza, ... Evandro Novaes in Tree Genetics & Genomes
    Article 13 July 2024
  18. C4-like Sesuvium sesuvioides (Aizoaceae) exhibits CAM in cotyledons and putative C4-like + CAM metabolism in adult leaves as revealed by transcriptome analysis

    Background

    The co-occurrence of C 4 and CAM photosynthesis in a single species seems to be unusual and rare. This is likely due to the difficulty in...

    Christian Siadjeu, Gudrun Kadereit in BMC Genomics
    Article Open access 13 July 2024
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