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  1. Article

    Open Access

    Single-nucleotide variant calling in single-cell sequencing data with Monopogen

    Single-cell omics technologies enable molecular characterization of diverse cell types and states, but how the resulting transcriptional and epigenetic profiles depend on the cell’s genetic background remains ...

    **zhuang Dou, Yukun Tan, Kian Hong Kock, Jun Wang, Xuesen Cheng in Nature Biotechnology (2024)

  2. Article

    Open Access

    A small-molecule TNIK inhibitor targets fibrosis in preclinical and clinical models

    Idiopathic pulmonary fibrosis (IPF) is an aggressive interstitial lung disease with a high mortality rate. Putative drug targets in IPF have failed to translate into effective therapies at the clinical level. ...

    Feng Ren, Alex Aliper, Jian Chen, Heng Zhao, Sujata Rao in Nature Biotechnology (2024)

  3. No Access

    Article

    Quantitative analysis of fitness and genetic interactions in yeast on a genome scale

    A statistical approach to quantitatively derive single and double mutant fitness from colony-based growth assays is described. The resultant SGA score permits assessment of yeast fitness and genetic interactio...

    Anastasia Baryshnikova, Michael Costanzo, Yungil Kim, Huiming Ding in Nature Methods (2010)