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  1. Article

    Open Access

    Integrating protein-protein interactions and text mining for protein function prediction

    Functional annotation of proteins remains a challenging task. Currently the scientific literature serves as the main source for yet uncurated functional annotations, but curation work is slow and expensive. Au...

    Samira Jaeger, Sylvain Gaudan, Ulf Leser, Dietrich Rebholz-Schuhmann in BMC Bioinformatics (2008)

  2. Article

    Open Access

    Assessment of disease named entity recognition on a corpus of annotated sentences

    In recent years, the recognition of semantic types from the biomedical scientific literature has been focused on named entities like protein and gene names (PGNs) and gene ontology terms (GO terms). Other sema...

    Antonio Jimeno, Ernesto Jimenez-Ruiz, Vivian Lee, Sylvain Gaudan in BMC Bioinformatics (2008)