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  1. From isolation to integration, a systems biology approach for building the Silicon Cell

    In the last decade, the field now commonly referred to as systems biology has developed rapidly. With the sequencing of whole genomes and the...
    Jacky L. Snoep, Hans V. Westerhoff in Systems Biology
    Chapter
  2. Adenosine to inosine RNA editing in animal cells

    Major advances in the understanding of adenosine deaminases acting on RNA (ADARs) have come from the generation of ADAR mutant animals. In mice,...
    Barry Hoopengardner, Mary A. O’Connell, ... Liam P. Keegan in Fine-Tuning of RNA Functions by Modification and Editing
    Chapter
  3. Regulation of S Phase

    Regulation of DNA replication is critical for accurate and timely dissemination of genomic material to daughter cells. The cell uses a variety of...
    Jamie K. Teer, Anindya Dutta in Cell Cycle Regulation
    Chapter
  4. Systems biology of apoptosis

    New approaches are required for the mathematical modelling and system identification of complex signal transduction networks, which are characterized...
    Martin Bentele, Roland Eils in Systems Biology
    Chapter
  5. Crystallographic Studies of Native and Mutant Orotidine 5′phosphate Decarboxylases

    This review aims to use the results of an approach combining crystallographic structure analysis with mutational studies as a framework for the...
    Ning Wu, Emil F. Pai in Orotidine Monophosphate Decarboxylase
    Chapter
  6. Functions of Rab GTPases in organelle biogenesis

    Rab GTPases regulate diverse aspects of the biogenesis of secretory and endocytic organelles. The conformational changes that accompany GTP binding...
    Christopher G. Burd, Ruth N. Collins in Regulatory Mechanisms of Intracellular Membrane Transport
    Chapter
  7. Histone Ubiquitylation and the Regulation of Transcription

    The small (76 amino acids) and highly conserved ubiquitin protein plays key roles in the physiology of eukaryotic cells. Protein ubiquitylation...
    Mary Ann Osley, Alastair B. Fleming, Cheng-Fu Kao in Chromatin Dynamics in Cellular Function
    Chapter
  8. The Generation and Recognition of Histone Methylation

    The posttranslational modification of histone proteins via methylation has important functions in gene activation, transcriptional silencing,...
    Michael S. Torok, Patrick A. Grant in Chromatin Dynamics in Cellular Function
    Chapter
  9. Histone Dynamics During Transcription: Exchange of H2A/H2B Dimers and H3/H4 Tetramers During Pol II Elongation

    Chromatin within eukaryotic cell nuclei accommodates many complex activities that require at least partial disassembly and reassembly of...
    Christophe Thiriet, Jeffrey J. Hayes in Chromatin Dynamics in Cellular Function
    Chapter
  10. Folding of newly synthesised proteins in the endoplasmic reticulum

    The endoplasmic reticulum (ER) is a membranous compartment that can be found within any nucleated eukaryotic cell. Its job is to oversee the...
    Sanjika Dias-Gunasekara, Adam M. Benham in Chaperones
    Chapter
  11. Mouse Models of Cell Cycle Regulators: New Paradigms

    In yeast, a single cyclin-dependent kinase (Cdk) is able to regulate diverse cell cycle transitions (S and M phases) by associating with multiple...
    Eiman Aleem, Philipp Kaldis in Cell Cycle Regulation
    Chapter
  12. Structural features of fungal genomes

    Eighteen fungal genomes have been sequenced to date from a variety of taxonomic groups, with fifteen Ascomycota, two Basidomycota and one...
    Phatthanaphong Wanchanthuek, Peter F. Hallin, ... David Ussery in Comparative Genomics
    Chapter
  13. Sterol Endocytosis and Trafficking in Plant Cells

    Structural sterols are integral components of biological membranes. They regulate membrane permeability and fluidity, and they influence the...
    Miroslav Ovečka, Irene K. Lichtscheidl in Plant Endocytosis
    Chapter
  14. SNAREs in Plant Endocytosis and the Post-Golgi Traffic

    In eukaryotic cells, the transport vesicles carry various cargo proteins from a donor compartment to a target compartment, and discharge the cargo...
    Masa H. Sato, Ryosuke L. Ohniwa, Tomohiro Uemura in Plant Endocytosis
    Chapter
  15. Plant Vacuoles: from Biogenesis to Function

    The plant vacuolar system is far more complex than originally expected and multiple sorting pathways leading to various types of vacuoles can be...
    Jean-Marc Neuhaus, Nadine Paris in Plant Endocytosis
    Chapter
  16. Endocytosis in Guard Cells

    Stomatal movement requires large and repetitive changes to cell volume and consequently surface area. These alterations in surface area are...
    Ulrike Homann in Plant Endocytosis
    Chapter
  17. Endocytosis and Actomyosin Cytoskeleton

    Mutual interactions between actin and endocytic assembly machineries are essential for successful clathrin-mediated endocytosis in yeast and...
    Jozef Šamaj, František Baluška, ... Diedrik Menzel in Plant Endocytosis
    Chapter
  18. Endocytosis and Membrane Recycling in Pollen Tubes

    In plants, tip-growing cells are an ideal system to investigate signal transduction mechanisms and, among these, pollen tubes are one of the...
    Rui Malhó, Pedro Castanho Coelho, ... Jan Derksen in Plant Endocytosis
    Chapter
  19. Plant Prevacuolar Compartments and Endocytosis

    Prevacuolar compartments (PVCs) are membrane-bound organelles mediating protein traffic from both Golgi and plasma membrane to vacuoles in...
    Sheung Kwan Lam, Yu Chung Tse, ... David G. Robinson in Plant Endocytosis
    Chapter
  20. The Roles of Chromatin Remodelling Factors in Replication

    Dynamic changes of chromatin structure control DNA-dependent events, including DNA replication. Along with DNA, chromatin organization must be...
    Ana Neves-Costa, Patrick Varga-Weisz in Chromatin Dynamics in Cellular Function
    Chapter
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