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  1. Toward fair graph neural networks via real counterfactual samples

    Graph neural networks (GNNs) have become pivotal in various critical decision-making scenarios due to their exceptional performance. However,...

    Zichong Wang, Meikang Qiu, ... Wenbin Zhang in Knowledge and Information Systems
    Article 15 July 2024
  2. Text summarization based on semantic graphs: an abstract meaning representation graph-to-text deep learning approach

    Nowadays, due to the constantly growing amount of textual information, automatic text summarization constitutes an important research area in natural...

    Panagiotis Kouris, Georgios Alexandridis, Andreas Stafylopatis in Journal of Big Data
    Article Open access 14 July 2024
  3. How clustering affects the convergence of decentralized optimization over networks: a Monte-Carlo-based approach

    Decentralized algorithms have gained substantial interest owing to advancements in cloud computing, Internet of Things (IoT), intelligent...

    Mohammadreza Doostmohammadian, Shahaboddin Kharazmi, Hamid R. Rabiee in Social Network Analysis and Mining
    Article 14 July 2024
  4. Enhancing SNV identification in whole-genome sequencing data through the incorporation of known genetic variants into the minimap2 index

    Motivation

    Alignment of reads to a reference genome sequence is one of the key steps in the analysis of human whole-genome sequencing data obtained...

    Guguchkin Egor, Kasianov Artem, ... Karpulevich Evgeny in BMC Bioinformatics
    Article Open access 13 July 2024
  5. DQMMBSC: design of an augmented deep Q-learning model for mining optimisation in IIoT via hybrid-bioinspired blockchain shards and contextual consensus

    Single-chained blockchains are highly secure but cannot be scaled to larger IIoT (Internet of Industrial Things) network scenarios due to storage...

    Manisha Gokuldas Gedam, Swapnili Karmore in International Journal of Data Science and Analytics
    Article 13 July 2024
  6. Cancer mutationscape: revealing the link between modular restructuring and intervention efficacy among mutations

    There is increasing evidence that biological systems are modular in both structure and function. Complex biological signaling networks such as gene...

    Daniel Plaugher, David Murrugarra in npj Systems Biology and Applications
    Article Open access 13 July 2024
  7. Enhancing OCT patch-based segmentation with improved GAN data augmentation and semi-supervised learning

    For optimum performance, deep learning methods, such as those applied for retinal and choroidal layer segmentation in optical coherence tomography...

    Jason Kugelman, David Alonso-Caneiro, ... Michael J. Collins in Neural Computing and Applications
    Article Open access 13 July 2024
  8. Evolution of hadron therapy from 1935 to 2005: a personal view

    Introduction

    Hadron therapy is today an established modality in cancer radiation therapy that, world-wide, is available in about hundred centres....

    Ugo Amaldi in Health and Technology
    Article Open access 12 July 2024
  9. The Multi-attribute impact of hyperlinks in blogs: an emotion-centric approach

    As a digital social medium, blogs have transformed into arenas where individuals can express their perspectives, concepts, and feelings. This...

    Stella Mbila-Uma, Oyindamola Koleoso, ... Nitin Agarwal in Social Network Analysis and Mining
    Article 12 July 2024
  10. HyperMatch: long-form text matching via hypergraph convolutional networks

    Semantic text matching plays a vital role in diverse domains, such as information retrieval, question answering, and recommendation. However, longer...

    Junwen Duan, Mingyi Jia, ... Jianxin Wang in Knowledge and Information Systems
    Article 12 July 2024
  11. Benchmarking and integrating human B-cell receptor genomic and antibody proteomic profiling

    Immunoglobulins (Ig), which exist either as B-cell receptors (BCR) on the surface of B cells or as antibodies when secreted, play a key role in the...

    Khang Lê Quý, Maria Chernigovskaya, ... Victor Greiff in npj Systems Biology and Applications
    Article Open access 12 July 2024
  12. METASEED: a novel approach to full-length 16S rRNA gene reconstruction from short read data

    Background

    With the emergence of Oxford Nanopore technology, now the on-site sequencing of 16S rRNA from environments is available. Due to the error...

    Melcy Philip, Knut Rudi, ... Lars-Gustav Snipen in BMC Bioinformatics
    Article Open access 12 July 2024
  13. Improving laryngeal cancer detection using chaotic metaheuristics integration with squeeze-and-excitation resnet model

    Laryngeal cancer (LC) represents a substantial world health problem, with diminished survival rates attributed to late-stage diagnoses. Correct...

    Sana Alazwari, Mashael Maashi, ... Samah Al Zanin in Health Information Science and Systems
    Article 12 July 2024
  14. expHRD: an individualized, transcriptome-based prediction model for homologous recombination deficiency assessment in cancer

    Background

    Homologous recombination deficiency (HRD) stands as a clinical indicator for discerning responsive outcomes to platinum-based chemotherapy...

    Jae Jun Lee, Hyun Ju Kang, ... **ho Kim in BMC Bioinformatics
    Article Open access 12 July 2024
  15. Building RadiologyNET: an unsupervised approach to annotating a large-scale multimodal medical database

    Background

    The use of machine learning in medical diagnosis and treatment has grown significantly in recent years with the development of...

    Mateja Napravnik, Franko Hržić, ... Ivan Štajduhar in BioData Mining
    Article Open access 12 July 2024
  16. Anomaly analytics in data-driven machine learning applications

    Machine learning is used widely to create a range of prediction or classification models. The quality of the machine learning (ML) models depends not...

    Article Open access 12 July 2024
  17. Temporal analysis of computational economics: a topic modeling approach

    This study offers a comprehensive investigation into the thematic evolution within computational economics over the past two decades, leveraging...

    Malvika Mishra, Santosh Kumar Vishwakarma, ... S. Anjana in International Journal of Data Science and Analytics
    Article Open access 11 July 2024
  18. Characteristics of the Structural Connectivity in Patients with Brain Injury and Chronic Health Symptoms: A Pilot Study

    Diffusion properties from diffusion tensor imaging (DTI) are exquisitely sensitive to white matter abnormalities incurred during traumatic brain...

    **aojian Kang, Byung C. Yoon, ... Maheen M. Adamson in Neuroinformatics
    Article 11 July 2024
  19. De-confounding representation learning for counterfactual inference on continuous treatment via generative adversarial network

    Counterfactual inference for continuous rather than binary treatment variables is more common in real-world causal inference tasks. While there are...

    Yonghe Zhao, Qiang Huang, ... Huiyan Sun in Data Mining and Knowledge Discovery
    Article 11 July 2024
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