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Showing 81-100 of 10,000 results
  1. Author Correction: The shaky foundations of simulating single-cell RNA sequencing data

    Helena L. Crowell, Sarah X. Morillo Leonardo, ... Mark D. Robinson in Genome Biology
    Article Open access 05 July 2024
  2. Equidae pythiosis in Brazil and the world: a systematic review of the last 63 years (1960–2023)

    This systematic review compiles reports of clinical pythiosis in horses, mules and donkeys from 1960 to 2023 worldwide, focusing on Brazil. We...

    Daniela Isabel Brayer Pereira, Sônia Avila Botton, ... Janio Morais Santurio in Brazilian Journal of Microbiology
    Article 05 July 2024
  3. Expanding the genetic and phenotypic spectrum of Baker–Gordon syndrome: a new de novo SYT1 variant

    We report the case of a Spanish pediatric patient with developmental delay, hypotonia, feeding difficulties, visual problems, and hyperkinetic...

    Francisco Javier Cotrina-Vinagre, María Elena Rodríguez-García, ... Francisco Martínez-Azorín in Journal of Genetics
    Article 05 July 2024
  4. Functional and evolutionary comparative analysis of the DIR gene family in Nicotiana tabacum L. and Solanum tuberosum L.

    Background

    The dirigent ( DIR ) genes encode proteins that act as crucial regulators of plant lignin biosynthesis. In Solanaceae species, members of...

    Tong Li, Wenbin Luo, ... **aofang **e in BMC Genomics
    Article Open access 05 July 2024
  5. Unraveling the genomic secrets of Tritonibacter mobilis AK171: a plant growth-promoting bacterium isolated from Avicennia marina

    The scarcity of freshwater resources resulting in a significant yield loss presents a pressing challenge in agriculture. To address this issue,...

    Amal Khalaf Alghamdi, Sabiha Parween, ... Maged M. Saad in BMC Genomics
    Article Open access 05 July 2024
  6. Dynamic Energy Budget model for E. coli growth in carbon and nitrogen limitation conditions

    Abstract

    The simulations and predictions obtained from mathematical models of bioprocesses conducted by microorganisms are not overvalued. Mechanistic...

    Konrad Matyja, Magdalena Lech in Applied Microbiology and Biotechnology
    Article Open access 05 July 2024
  7. Population genetic structure of Culex tritaeniorhynchus in different types of climatic zones in China

    Background

    Culex tritaeniorhynchus is widely distributed in China, from Hainan Island in the south to Heilongjiang in the north, covering tropical,...

    Ye Zhang, Haifang Wang, ... Hongmei Liu in BMC Genomics
    Article Open access 05 July 2024
  8. Mechanisms of microbial co-aggregation in mixed anaerobic cultures

    Abstract

    Co-aggregation of anaerobic microorganisms into suspended microbial biofilms (aggregates) serves ecological and biotechnological functions....

    Anna Doloman, Diana Z. Sousa in Applied Microbiology and Biotechnology
    Article Open access 04 July 2024
  9. Sha** Drosophila eggs: unveiling the roles of Arpc1 and cpb in morphogenesis

    The Drosophila egg chamber (EC) starts as a spherical tissue at the beginning. With maturation, the outer follicle cells of EC collectively migrate...

    Poulami Chatterjee, Sandipan Mukherjee, Pralay Majumder in Functional & Integrative Genomics
    Article 04 July 2024
  10. LongTR: genome-wide profiling of genetic variation at tandem repeats from long reads

    Tandem repeats are frequent across the human genome, and variation in repeat length has been linked to a variety of traits. Recent improvements in...

    Helyaneh Ziaei Jam, Justin M. Zook, ... Melissa Gymrek in Genome Biology
    Article Open access 04 July 2024
  11. Complete genome sequence, phenotypic correlation and pangenome analysis of uropathogenic Klebsiella spp

    Urinary tract infections (UTI) by antibiotic resistant and virulent K. pneumoniae are a growing concern. Understanding the genome and validating the...

    Abhirami Krishnamoorthy Sundaresan, Jaya Gangwar, ... Jayapradha Ramakrishnan in AMB Express
    Article Open access 04 July 2024
  12. Assessment of reference genes for qRT-PCR normalization to elucidate host response to African swine fever infection

    Viral infection disrupts the normal regulation of the host gene’s expression. In order to normalise the expression of dysregulated host genes upon...

    Swaraj Rajkhowa, Joyshikh Sonowal, ... Vivek Kumar Gupta in Brazilian Journal of Microbiology
    Article 04 July 2024
  13. VirRep: a hybrid language representation learning framework for identifying viruses from human gut metagenomes

    Identifying viruses from metagenomes is a common step to explore the virus composition in the human gut. Here, we introduce VirRep, a hybrid language...

    Yanqi Dong, Wei-Hua Chen, **ng-Ming Zhao in Genome Biology
    Article Open access 04 July 2024
  14. Identification and characterization of the RcTCP gene family and its expression in response to abiotic stresses in castor bean

    Background

    The TCP ( teosinte branched1/cincinnata/proliferating cell factor ) family plays a prominent role in plant development and stress responses....

    Yanxiao Li, **ngyang Liu, ... Peng Liu in BMC Genomics
    Article Open access 04 July 2024
  15. Influence of the agrochemical benomyl on Cryptococcus gattii-plant interaction in vitro and in vivo

    Cryptococcus gattii , an environmental fungus, is one of the agents of cryptococcosis. The influence of agrochemicals on fungal resistance to...

    João C. M. Dornelas, Vivian M. Paixão, ... Daniel A. Santos in Brazilian Journal of Microbiology
    Article 04 July 2024
  16. Coptis rhizome extract influence on Streptococcus pneumoniae through autolysin activation

    This study investigated the antibacterial properties of Coptis rhizome , a plant traditionally used for respiratory infections, against Streptoccus...

    Eon-Bee Lee, Kyubae Lee in AMB Express
    Article Open access 04 July 2024
  17. Endophytic Aspergillus fumigatiaffinis: Novel paclitaxel production and optimization insights

    Abstract

    This study investigated the potential of endophytic fungi to produce paclitaxel (Taxol®), a potent anticancer compound widely employed in...

    Marwa Obiedallah, Alaa A. Yasien, ... M. Bassam Aboul-Nasr in Applied Microbiology and Biotechnology
    Article Open access 03 July 2024
  18. Genetic diversity and population structure of wheat landraces in Southern Winter Wheat Region of China

    Background

    Wheat landraces are considered a valuable source of genetic diversity for breeding programs. It is useful to evaluate the genetic diversity...

    Ying Liu, Bisheng Fu, ... Jizhong Wu in BMC Genomics
    Article Open access 03 July 2024
  19. Genome-wide identification and molecular evolution of Dof transcription factors in Cyperus esculentus

    Dof transcription factor family in Cyperus esculentus genome was identified and analyzed using bioinformatics. The analysis results revealed that C.esculentus...

    Chun Fu, ZiHui Liao, ... YaoJun Yang in BMC Genomics
    Article Open access 03 July 2024
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